RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ASB15Q8WXK1 588 aa22.12■■□□□ 1.13
NPAS3-201ENST00000346562 DPH7Q9BTV6 452 aa22.12■■□□□ 1.13
NPAS3-201ENST00000346562 SIX4Q9UIU6 781 aa22.12■■□□□ 1.13
NPAS3-201ENST00000346562 OXSR1O95747 527 aaPredicted RBP22.11■■□□□ 1.13
NPAS3-201ENST00000346562 OTX2P32243 289 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 ATP6AP1Q15904 470 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 EXOC3L2Q2M3D2 409 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 ZNF829Q3KNS6 432 aaPredicted RBP22.11■■□□□ 1.13
NPAS3-201ENST00000346562 MSS51Q4VC12 460 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 TCTE1Q5JU00 501 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 GTF2IRD2BQ6EKJ0 949 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 GTF2IRD2Q86UP8 949 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 MFSD8Q8NHS3 518 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 TSACCQ96A04 125 aaPredicted RBP22.11■■□□□ 1.13
NPAS3-201ENST00000346562 HOXD1Q9GZZ0 328 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.11■■□□□ 1.13
NPAS3-201ENST00000346562 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.11■■□□□ 1.13
NPAS3-201ENST00000346562 RP2O75695 350 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 SFTPBP07988 381 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 HS3ST5Q8IZT8 346 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 ZNF675Q8TD23 568 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 MSLNLQ96KJ4 702 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 SLC6A7Q99884 636 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 NKX2-4Q9H2Z4 354 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 CCRL2O00421 344 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 AXIN1O15169 862 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 FECHP22830 423 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 RUNX3Q13761 415 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 UMODL1-AS1Q8N2C9 162 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 CHCHD4Q8N4Q1 142 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 ZNF296Q8WUU4 475 aaPredicted RBP22.11■■□□□ 1.13
NPAS3-201ENST00000346562 PARP4Q9UKK3 1724 aaKnown RBP22.11■■□□□ 1.13
NPAS3-201ENST00000346562 LTBP3Q9NS15 1303 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 RBBP9O75884 186 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 IFNA1P01562 189 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 GRM7Q14831 915 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 TMEM69Q5SWH9 247 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 SERINC5Q86VE9 423 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 TMEM151BQ8IW70 566 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 PHTF2Q8N3S3 785 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 HORMAD2Q8N7B1 307 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 RADILQ96JH8 1075 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 ROBO1Q9Y6N7 1651 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 C6orf136Q5SQH8 315 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 UNC5DQ6UXZ4 953 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 CNN2Q99439 309 aaKnown RBP22.11■■□□□ 1.13
NPAS3-201ENST00000346562 STYXL1Q9Y6J8 313 aa22.11■■□□□ 1.13
NPAS3-201ENST00000346562 GNAO1P09471 354 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 RABEPKQ7Z6M1 372 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 FBXL20Q96IG2 436 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 EXTL2Q9UBQ6 330 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 MYO5BQ9ULV0 1848 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 ZNF175Q9Y473 711 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 ZNF850A8MQ14 1090 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 SLITRK5O94991 958 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 C6P13671 934 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 CSF2RAP15509 400 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 CDH15P55291 814 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 SAMD12Q8N8I0 201 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 TXNDC5Q8NBS9 432 aaKnown RBP22.1■■□□□ 1.13
NPAS3-201ENST00000346562 SOCS2O14508 198 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 HPRP00739 348 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 MELKQ14680 651 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 FAM46BQ96A09 425 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 BRINP1O60477 761 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 RGS9O75916 674 aaPredicted RBP22.1■■□□□ 1.13
NPAS3-201ENST00000346562 HK3P52790 923 aa22.1■■□□□ 1.13
NPAS3-201ENST00000346562 C12orf76Q8N812 135 aaPredicted RBP22.1■■□□□ 1.13
NPAS3-201ENST00000346562 AURKAO14965 403 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 NAA10P41227 235 aaPredicted RBP22.09■■□□□ 1.13
NPAS3-201ENST00000346562 ARSFP54793 590 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 CRYZQ08257 329 aaKnown RBP22.09■■□□□ 1.13
NPAS3-201ENST00000346562 PON2Q15165 354 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 CES4AQ5XG92 561 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 XKRXQ6PP77 449 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 DUOX1Q9NRD9 1551 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 FEZF1A0PJY2 475 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 SEC14L5O43304 696 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 PEX14O75381 377 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 IQCF3P0C7M6 154 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 GJA8P48165 433 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 RNF144AP50876 292 aaPredicted RBP22.09■■□□□ 1.13
NPAS3-201ENST00000346562 DIO2Q92813 273 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 MRGPRX2Q96LB1 330 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 HDAC2Q92769 488 aaKnown RBP22.09■■□□□ 1.13
NPAS3-201ENST00000346562 ZNF442Q9H7R0 627 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 RIPPLY1Q0D2K3 151 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 BCL2L15Q5TBC7 163 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 SCML1Q9UN30 329 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 PIAS3Q9Y6X2 628 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 SLC22A31A6NKX4 558 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 NNATQ16517 81 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 CDNFQ49AH0 187 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 NANOGP8Q6NSW7 305 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 FKBP10Q96AY3 582 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 NANOGQ9H9S0 305 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 COPZ2Q9P299 210 aa22.09■■□□□ 1.13
NPAS3-201ENST00000346562 GXYLT2A0PJZ3 443 aa22.08■■□□□ 1.13
NPAS3-201ENST00000346562 BEST1O76090 585 aa22.08■■□□□ 1.13
NPAS3-201ENST00000346562 S100PP25815 95 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms