RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 OSMP13725 252 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 CMPK1P30085 196 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 IGFALSP35858 605 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 DLSTP36957 453 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 MLLT3P42568 568 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 BDKRB1P46663 353 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 RPS24P62847 133 aaKnown RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF33BQ06732 778 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 LASP1Q14847 261 aaKnown RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 PLEKHN1Q494U1 663 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 CDNFQ49AH0 187 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 B3GNT2Q9NY97 397 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 VAPAQ9P0L0 249 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 SLC35G6P0C7Q6 338 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ART1P52961 327 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 RASGEF1BQ0VAM2 473 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 VGLL4Q14135 290 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 RCAN2Q14206 197 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 C1QTNF12Q5T7M4 302 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 NADSYN1Q6IA69 706 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 OR5T2Q8NGG2 359 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 AUTS2Q8WXX7 1259 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 GGHQ92820 318 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 NT5C3BQ969T7 300 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 SLC28A3Q9HAS3 691 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 SLAMF7Q9NQ25 335 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 TRBV2A0A0J9YWF9 115 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 EIF3FO00303 357 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 GRIN3BO60391 1043 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 UCHL1P09936 223 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 GCGRP47871 477 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 TGM4P49221 684 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ACTC1P68032 377 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ACTA1P68133 377 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 CTU1Q7Z7A3 348 aaKnown RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ARL14Q8N4G2 192 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 TMEM45AQ9NWC5 275 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 GMPR2Q9P2T1 348 aaKnown RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF225Q9UK10 706 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 MYH7P12883 1935 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 A6NIN4 97 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 AOC2O75106 756 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF821O75541 412 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 POP4O95707 220 aaKnown RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 ALPPL2P10696 532 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 CAMLGP49069 296 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 HES5Q5TA89 166 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 NSMAFQ92636 917 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 EPYCQ99645 322 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 INPP5KQ9BT40 448 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 METTL17Q9H7H0 456 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-202ENST00000345356 GORASP2Q9H8Y8 452 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 PCTPQ9UKL6 214 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 AP1M2Q9Y6Q5 423 aa11.59□□□□□ -0.55
COL12A1-202ENST00000345356 WASH3PC4AMC7 463 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 SOX30O94993 753 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 CD3GP09693 182 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 JUNBP17275 347 aaPredicted RBP11.58□□□□□ -0.55
COL12A1-202ENST00000345356 OR1D2P34982 312 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 OPCMLQ14982 345 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 PRAMEF14Q5SWL7 426 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 AGTRAPQ6RW13 159 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 GSG1LQ6UXU4 331 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 CLECL1Q8IZS7 167 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 PNLDC1Q8NA58 520 aaKnown RBP11.58□□□□□ -0.55
COL12A1-202ENST00000345356 SNED1Q8TER0 1413 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 TSGA13Q96PP4 275 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 NMNAT1Q9HAN9 279 aaPredicted RBP11.58□□□□□ -0.55
COL12A1-202ENST00000345356 GFOD1Q9NXC2 390 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 STYXL1Q9Y6J8 313 aa11.58□□□□□ -0.55
COL12A1-202ENST00000345356 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 PRSS44E7EML9 344 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 TSPAN15O95858 294 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 AGR2O95994 175 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 MT-ND4P03905 459 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 FGF4P08620 206 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 NAA10P41227 235 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 CCR8P51685 355 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 TMEM205Q6UW68 189 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 MYNNQ9NPC7 610 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 EIF1AYO14602 144 aaKnown RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 POLR1CO15160 346 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 CYP17A1P05093 508 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 ETFAP13804 333 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 ACPPP15309 386 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 EIF1AXP47813 144 aaKnown RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 ERVPABLB-1P60509 514 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 KCT2Q8NC54 265 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 OR8D1Q8WZ84 308 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 ST8SIA2Q92186 375 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 SLC7A6Q92536 515 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 SLC39A13Q96H72 371 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 TMEM41AQ96HV5 264 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 C17orf62Q9BQA9 187 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 RDH14Q9HBH5 336 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 LAMP5Q9UJQ1 280 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 CHD2O14647 1828 aaKnown RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 A0A1B0GTW7 788 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 ARSBP15848 533 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms