RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 L3MBTL4Q8NA19 623 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ATP6V1C2Q8NEY4 427 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ITPKCQ96DU7 683 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 TCEAL4Q96EI5 215 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 MCCC1Q96RQ3 725 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 SLC6A16Q9GZN6 736 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 OR51E2Q9H255 320 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 HS3ST2Q9Y278 367 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 CMAHPQ9Y471 501 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 A8MV72 311 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 M0R3H8 397 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 B4GALT2O60909 372 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 F11P03951 625 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 HBA1P69905 142 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 AFMIDQ63HM1 303 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 DLEU7Q6UYE1 221 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 OR2T33Q8NG76 320 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 OR52P1PQ8NH57 321 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 MOAP1Q96BY2 351 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 DMRT3Q9NQL9 472 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 WDR37Q9Y2I8 494 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 TMEM150CB9EJG8 249 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 PYCR1P32322 319 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 BMPR1AP36894 532 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 CDKN2CP42773 168 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 TM4SF4P48230 202 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 TAS2R38P59533 333 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 SIM1P81133 766 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 HYAL2Q12891 473 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 HNRNPA1L2Q32P51 320 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 GTF2IRD2BQ6EKJ0 949 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 RNF111Q6ZNA4 994 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 NCCRP1Q6ZVX7 275 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 LINGO2Q7L985 606 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 GTF2IRD2Q86UP8 949 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 OR4N5Q8IXE1 308 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 IQCF1Q8N6M8 205 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 RASGEF1AQ8N9B8 481 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 C7orf57Q8NEG2 295 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 OR2A12Q8NGT7 310 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 JPH3Q8WXH2 748 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 CIDECQ96AQ7 238 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 GINS4Q9BRT9 223 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 GPN2Q9H9Y4 310 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 ACOT13Q9NPJ3 140 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ZFR2Q9UPR6 939 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 ANTXRLA6NF34 631 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 MRPS14O60783 128 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 MT-ND5P03915 603 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 TYRP1P17643 537 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 DUS1LQ6P1R4 473 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 TBPL2Q6SJ96 375 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 TMEM107Q6UX40 140 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 RPTNQ6XPR3 784 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 GNPDA2Q8TDQ7 276 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 TTYH1Q9H313 450 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 ENAMQ9NRM1 1142 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 LYARQ9NX58 379 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 HSFX1Q9UBD0 423 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 IFT52Q9Y366 437 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 HSPB11Q9Y547 144 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 PCDHGB6Q9Y5F9 930 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 NRAPQ86VF7 1730 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 JRKO75564 520 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 PEPDP12955 493 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 MTNR1AP48039 350 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ENPP2Q13822 863 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 UGT8Q16880 541 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 TMEM35AQ53FP2 167 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 RPS26P11Q5JNZ5 115 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 ZNF691Q5VV52 312 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 MLIPQ5VWP3 458 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 DPPA4Q7L190 304 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 LIMS2Q7Z4I7 341 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ACBD7Q8N6N7 88 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 TBC1D15Q8TC07 691 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 SLCO4A1Q96BD0 722 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 HDHD5Q9BXW7 423 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 RMI1Q9H9A7 625 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 CPNE5Q9HCH3 593 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 HRASLS2Q9NWW9 162 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 RGS17Q9UGC6 210 aaPredicted RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 TMEM5Q9Y2B1 443 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 OR1A2Q9Y585 309 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 STON1Q9Y6Q2 735 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 IQCMA0A1B0GVH7 501 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 KRBA1A5PL33 1030 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 RPP14O95059 124 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 ZDHHC11BP0C7U3 371 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 LHCGRP22888 699 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ARFIP1P53367 373 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ADARB1P78563 741 aaKnown RBP6.85□□□□□ -1.31
VCAN-202ENST00000342785 TBRG1Q3YBR2 411 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 B3GNT8Q7Z7M8 397 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 SNX29P2Q8IUI4 249 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ALDH16A1Q8IZ83 802 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 SAMD12Q8N8I0 201 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 PSD4Q8NDX1 1056 aa6.85□□□□□ -1.31
VCAN-202ENST00000342785 ZNF740Q8NDX6 193 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms