RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 CHFRQ96EP1 664 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SLITRK2Q9H156 845 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SFXN1Q9H9B4 322 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 PCDHA9Q9Y5H5 950 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 PIAS3Q9Y6X2 628 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 ALPK2Q86TB3 2170 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 K7ESM1 405 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 UPK1BO75841 260 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 NUDT7P0C024 238 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 CBLP22681 906 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 STAT5AP42229 794 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 CLCN7P51798 805 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 AP2S1P53680 142 aaPredicted RBP12.89□□□□□ -0.35
TMEM248-201ENST00000341567 GABARAPL2P60520 117 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SLAMF1Q13291 335 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 ZNF311Q5JNZ3 666 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 LIPJQ5W064 366 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SBSNQ6UWP8 590 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 PRSS48Q7RTY5 328 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 PHC2Q8IXK0 858 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 PELI3Q8N2H9 469 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 GATSQ8NAP1 163 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 POMGNT2Q8NAT1 580 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 OR5M3Q8NGP4 307 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SPPL3Q8TCT6 385 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 ZNF689Q96CS4 500 aaPredicted RBP12.89□□□□□ -0.35
TMEM248-201ENST00000341567 ZNF717Q9BY31 904 aaPredicted RBP12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SLC17A9Q9BYT1 436 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SMURF1Q9HCE7 757 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 NLKQ9UBE8 527 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 C2orf92A0A1B0GVN3 265 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 OR6C74A6NCV1 312 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 FRS3O43559 492 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 LATS1O95835 1130 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 VSX2P58304 361 aaPredicted RBP12.89□□□□□ -0.35
TMEM248-201ENST00000341567 MRPL58Q14197 206 aaKnown RBP12.89□□□□□ -0.35
TMEM248-201ENST00000341567 SHFQ7M4L6 423 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 PEX5LQ8IYB4 626 aa12.89□□□□□ -0.35
TMEM248-201ENST00000341567 KIF13BQ9NQT8 1826 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 DNAJB5O75953 348 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 HIST1H2ABP04908 130 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 PPP2R2BQ00005 443 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 HIST3H2AQ7L7L0 130 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 CADM3Q8N126 398 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 PAPD5Q8NDF8 572 aaKnown RBP12.88□□□□□ -0.35
TMEM248-201ENST00000341567 HIST1H2ACQ93077 130 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 DOHHQ9BU89 302 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 TAS2R7Q9NYW3 318 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 MAN2B2Q9Y2E5 1009 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 SBK3P0C264 359 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 CNR2P34972 360 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 HTR2BP41595 481 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 RPS26P11Q5JNZ5 115 aaPredicted RBP12.88□□□□□ -0.35
TMEM248-201ENST00000341567 SPRED1Q7Z699 444 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 OXR1Q8N573 874 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 OR6Q1Q8NGQ2 317 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 LMX1AQ8TE12 382 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 GTF2H4Q92759 462 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 MAELQ96JY0 434 aaKnown RBP12.88□□□□□ -0.35
TMEM248-201ENST00000341567 ZNF583Q96ND8 569 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 PDCD10Q9BUL8 212 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 TSSK6Q9BXA6 273 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 CPNE5Q9HCH3 593 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 PNO1Q9NRX1 252 aaKnown RBP12.88□□□□□ -0.35
TMEM248-201ENST00000341567 DCAF13Q9NV06 445 aaKnown RBP12.88□□□□□ -0.35
TMEM248-201ENST00000341567 PCDHB11Q9Y5F2 797 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 OR2B3O76000 313 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 TFPIP10646 304 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 SOX3P41225 446 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 SLC3A1Q07837 685 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 SP140Q13342 867 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 MAB21L1Q13394 359 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 GINS1Q14691 196 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 NXPE4Q6UWF7 544 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 HSDL2Q6YN16 418 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 B3GNT8Q7Z7M8 397 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 CMAHPQ9Y471 501 aa12.88□□□□□ -0.35
TMEM248-201ENST00000341567 INMT-MINDY4F8WBC2 141 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 CLDN4O14493 209 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 OR7A17O14581 309 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 CAPN5O15484 640 aaPredicted RBP12.87□□□□□ -0.35
TMEM248-201ENST00000341567 SF3B4Q15427 424 aaKnown RBP eCLIP12.87□□□□□ -0.356e-9■■■■■ 27.6
TMEM248-201ENST00000341567 TMEM107Q6UX40 140 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 HDHD5Q9BXW7 423 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 ZBP1Q9H171 429 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 HSFX1Q9UBD0 423 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 FAM86C2PA6NEL3 165 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 C12orf71A8MTZ7 269 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 AHCYP23526 432 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 AOAHP28039 575 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 GUCA1AP43080 201 aaPredicted RBP12.87□□□□□ -0.35
TMEM248-201ENST00000341567 MAD2L1BPQ15013 274 aaPredicted RBP12.87□□□□□ -0.35
TMEM248-201ENST00000341567 RHOXF1Q8NHV9 184 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 ASB11Q8WXH4 323 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 NXPE3Q969Y0 559 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 MAPKAP1Q9BPZ7 522 aa12.87□□□□□ -0.35
TMEM248-201ENST00000341567 TMEM121BQ9BXQ6 578 aaPredicted RBP12.87□□□□□ -0.35
TMEM248-201ENST00000341567 TMEM27Q9HBJ8 222 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms