RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SLC25A51Q9H1U9 297 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 PCDH18Q9HCL0 1135 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 RUVBL2Q9Y230 463 aaKnown RBP9.9□□□□□ -0.82
ATXN3-201ENST00000340660 NINQ8N4C6 2090 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 HEATR5BQ9P2D3 2071 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 FRAS1Q86XX4 4008 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 DPRXA6NFQ7 191 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 SLC22A31A6NKX4 558 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 EIF3FO00303 357 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 FRS3O43559 492 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 HCRTR2O43614 444 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 ACTL6AO96019 429 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 RPN2P04844 631 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 ZSCAN22P10073 491 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 PKMP14618 531 aaKnown RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 ACRV1P26436 265 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 CDH11P55287 796 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 IFI35P80217 286 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 PPIDQ08752 370 aaKnown RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 PAFAH1B3Q15102 231 aaKnown RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 LEG1Q6P5S2 330 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 LDB1Q86U70 411 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 SLC22A15Q8IZD6 547 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 MAGEC3Q8TD91 643 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 ZNF597Q96LX8 424 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 DOHHQ9BU89 302 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 PNO1Q9NRX1 252 aaKnown RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 DNAJC11Q9NVH1 559 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 AURKAIP1Q9NWT8 199 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 PCDHGB5Q9Y5G0 923 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 CHCHD2Q9Y6H1 151 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-201ENST00000340660 IKBKGQ9Y6K9 419 aa9.89□□□□□ -0.83
ATXN3-201ENST00000340660 DNAH7Q8WXX0 4024 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 KRTAP9-7A8MTY7 169 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 PLOD2O00469 737 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 RGS13O14921 159 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 EMC8O43402 210 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 CHST10O43529 356 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 UBOX5O94941 541 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 GNA14O95837 355 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 TTKP33981 857 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 RELAQ04206 551 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 CLEC16AQ2KHT3 1053 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 FNDC7Q5VTL7 733 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 ENPP6Q6UWR7 440 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 HSDL2Q6YN16 418 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 SNX20Q7Z614 316 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 SERPINA9Q86WD7 417 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 ASZ1Q8WWH4 475 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 ATL1Q8WXF7 558 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 PDLIM2Q96JY6 352 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 GNRHR2Q96P88 292 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 CNOT11Q9UKZ1 510 aaKnown RBP9.88□□□□□ -0.83
ATXN3-201ENST00000340660 PROCRQ9UNN8 238 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 C15orf41Q9Y2V0 281 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 EXPH5Q8NEV8 1989 aa9.88□□□□□ -0.83
ATXN3-201ENST00000340660 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 TRBV5-4A0A0C4DH59 114 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 PSMA7O14818 248 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 STK10O94804 968 aaKnown RBP9.87□□□□□ -0.83
ATXN3-201ENST00000340660 AP2A2O94973 939 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 ATP1A3P13637 1013 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 ITGALP20701 1170 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 PRTN3P24158 256 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 SYKP43405 635 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 BDKRB1P46663 353 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 NDUFA8P51970 172 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 WNT3AP56704 352 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 GBE1Q04446 702 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 FUT7Q11130 342 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 SLC10A2Q12908 348 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-201ENST00000340660 CARTPTQ16568 116 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 CCDC122Q5T0U0 273 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 SCIMPQ6UWF3 145 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 YRDCQ86U90 279 aaKnown RBP9.87□□□□□ -0.83
ATXN3-201ENST00000340660 GLCCI1Q86VQ1 547 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 CDKL3Q8IVW4 592 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-201ENST00000340660 ZNF321PQ8N8H1 164 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 CCNYQ8ND76 341 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 OR10G3Q8NGC4 313 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 OR13C4Q8NGS5 318 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 IMPACTQ9P2X3 320 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 CAPN11Q9UMQ6 739 aa9.87□□□□□ -0.83
ATXN3-201ENST00000340660 ABCA13Q86UQ4 5058 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 LOC105371242A0A075B767 164 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 LOC390937A0A1W2PQ73 354 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 E7ENX8 843 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 F8VZ95 297 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 CCL22O00626 93 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 RNF8O76064 485 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 BCL10O95999 233 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 FTH1P02794 183 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 CMA1P23946 247 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 KRTAP10-3P60369 221 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 IRF9Q00978 393 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 TBL3Q12788 808 aaKnown RBP9.86□□□□□ -0.83
ATXN3-201ENST00000340660 PNOCQ13519 176 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 TOMM20Q15388 145 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 SLC1A5Q15758 541 aa9.86□□□□□ -0.83
ATXN3-201ENST00000340660 CCDC183Q5T5S1 534 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms