RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 VPS29Q9UBQ0 182 aa12.37□□□□□ -0.43
SIRPB3P-201ENST00000340424 SUCOQ9UBS9 1254 aaKnown RBP12.37□□□□□ -0.43
SIRPB3P-201ENST00000340424 GRID1Q9ULK0 1009 aa12.37□□□□□ -0.43
SIRPB3P-201ENST00000340424 ZGRF1Q86YA3 2104 aa12.37□□□□□ -0.43
SIRPB3P-201ENST00000340424 C1orf226A1L170 272 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 WWP2O00308 870 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 PPP6CO00743 305 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 PEX1O43933 1283 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 SLC19A2O60779 497 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 ULK1O75385 1050 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 ESRRBO95718 433 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 CRHR1P34998 444 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 CA7P43166 264 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 MEOX1P50221 254 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 TUSC1Q2TAM9 212 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 SGO1Q5FBB7 561 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 NDUFAF5Q5TEU4 345 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 C6orf163Q5TEZ5 329 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 ZYG11AQ6WRX3 759 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 RNF111Q6ZNA4 994 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 RTL4Q6ZR62 310 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 RGS9BPQ6ZS82 235 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 RPS27LQ71UM5 84 aaKnown RBP12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 SLC29A4Q7RTT9 530 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 MAMDC2Q7Z304 686 aaPredicted RBP12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 HDXQ7Z353 690 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 COMMD6Q7Z4G1 85 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 SULF2Q8IWU5 870 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 HOMEZQ8IX15 550 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 RIBC1Q8N443 379 aaPredicted RBP12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 CDYL2Q8N8U2 506 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 ZFP62Q8NB50 900 aaPredicted RBP12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 OR4K14Q8NGD5 310 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 C16orf52Q8NHV5 167 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 METTL6Q8TCB7 284 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 RNF166Q96A37 237 aaPredicted RBP12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 FAIM2Q9BWQ8 316 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 VIPAS39Q9H9C1 493 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 MID2Q9UJV3 735 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 ZNF225Q9UK10 706 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 PSME2Q9UL46 239 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 ZNF835Q9Y2P0 537 aa12.36□□□□□ -0.43
SIRPB3P-201ENST00000340424 TRGV8A0A0C4DH27 118 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 A0A1B0GTL3 188 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 MYOCOSA0A1B0GUC4 107 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 SERTM1A2A2V5 107 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 GOLGA6L10A6NI86 522 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 GLOD5A6NK44 160 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 NPIPA5E9PKD4 350 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 MANBAO00462 879 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 ASNA1O43681 348 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 PRKRAO75569 313 aaKnown RBP12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 OR6B1O95007 311 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 OR4F21O95013 312 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 GBAP04062 536 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 SHBGP04278 402 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 RNF224P0DH78 156 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 TSPAN8P19075 237 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 HMOX2P30519 316 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 SOX3P41225 446 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 GSTM5P46439 218 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 ST13P50502 369 aaKnown RBP12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 DNAJB13P59910 316 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 GALNT1Q10472 559 aaPredicted RBP12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 SPIN4Q56A73 249 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 PIGGQ5H8A4 983 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 C1QL3Q5VWW1 255 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 IL20RBQ6UXL0 311 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 RPTNQ6XPR3 784 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 Q6ZPB1 254 aaPredicted RBP12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 GK5Q6ZS86 529 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 SH2D5Q6ZV89 423 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 MDGA2Q7Z553 956 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 FJX1Q86VR8 437 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 SPPL2CQ8IUH8 684 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 GALNT12Q8IXK2 581 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 C9orf40Q8IXQ3 194 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 EID3Q8N140 333 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 CPSF7Q8N684 471 aaKnown RBP12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 ZNF321PQ8N8H1 164 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 PPWD1Q96BP3 646 aaKnown RBP12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 CNPPD1Q9BV87 410 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 SHCBP1LQ9BZQ2 653 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 CXorf21Q9HAI6 301 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 FARSBQ9NSD9 589 aaKnown RBP12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 TEX10Q9NXF1 929 aaPredicted RBP12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 MCM8Q9UJA3 840 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 NPIPA1Q9UND3 350 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 PCDHA9Q9Y5H5 950 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 ICE1Q9Y2F5 2266 aa12.35□□□□□ -0.43
SIRPB3P-201ENST00000340424 NBPF19A0A087WUL8 3843 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 A0A1W2PPM1 405 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 G3V2L1 256 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 ACOT7O00154 380 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 COPEO14579 308 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 TFECO14948 347 aaPredicted RBP12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 PROCP04070 461 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 NUDT17P0C025 328 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 SLCO1A2P46721 670 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 ERVK-8P63133 956 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms