RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 KNL1Q8NG31 2342 aa15.32■□□□□ 0.04
HPS1-202ENST00000338546 ABCA7Q8IZY2 2146 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 TMEM131Q92545 1883 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 A0A1B0GTW7 788 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 TLCD2A6NGC4 264 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 hCG_2039718K7EN88 272 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 H6PDO95479 791 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 SNAP29O95721 258 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 AGR2O95994 175 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
HPS1-202ENST00000338546 FEN1P39748 380 aaKnown RBP15.31■□□□□ 0.04
HPS1-202ENST00000338546 XKP51811 444 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 VSX2P58304 361 aaPredicted RBP15.31■□□□□ 0.04
HPS1-202ENST00000338546 PPP1CAP62136 330 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 ZXDAP98168 799 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 NDUFA9Q16795 377 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 PRTGQ2VWP7 1150 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 C6orf132Q5T0Z8 1188 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 GARNL3Q5VVW2 1013 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 WDR5BQ86VZ2 330 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 ARHGEF39Q8N4T4 335 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 BBS10Q8TAM1 723 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 SPPL2AQ8TCT8 520 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 CYGBQ8WWM9 190 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 ZDHHC12Q96GR4 267 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 TMEM121BQ9BXQ6 578 aaPredicted RBP15.31■□□□□ 0.04
HPS1-202ENST00000338546 MRPS26Q9BYN8 205 aaKnown RBP15.31■□□□□ 0.04
HPS1-202ENST00000338546 OR51I1Q9H343 314 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 IL21RQ9HBE5 538 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 ANKHQ9HCJ1 492 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 ENAMQ9NRM1 1142 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 PTGFRNQ9P2B2 879 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 MUTYHQ9UIF7 546 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 LIPT1Q9Y234 373 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 MYRFQ9Y2G1 1151 aa15.31■□□□□ 0.04
HPS1-202ENST00000338546 DPPA5A6NC42 116 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 SLC9B1P1A6NJY1 282 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 DUXAA6NLW8 204 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 WASHC1A8K0Z3 465 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 RHPN2P1A8MT19 583 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 A8MVJ9 347 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 NUDT21O43809 227 aaKnown RBP15.3■□□□□ 0.04
HPS1-202ENST00000338546 PRAMEF10O60809 474 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 BMP10O95393 424 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 C9P02748 559 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 BCHEP06276 602 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 ETS2P15036 469 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 GNSP15586 552 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 CTSKP43235 329 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 GPR3P46089 330 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 MAPK10P53779 464 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 IST1P53990 364 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 EMP3P54852 163 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 IL18R1Q13478 541 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 DEFB133Q30KQ1 61 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 KCTD21Q4G0X4 260 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 TMEM179BQ7Z7N9 219 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 KRT73Q86Y46 540 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 LGI4Q8N135 537 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 ZNF555Q8NEP9 628 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 ADAMTS18Q8TE60 1221 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 ZNF300Q96RE9 604 aaPredicted RBP15.3■□□□□ 0.04
HPS1-202ENST00000338546 BTBD2Q9BX70 525 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 FAM192AQ9GZU8 254 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 SERHL2Q9H4I8 314 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 RUBCNLQ9H714 662 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 FAM60AQ9NP50 221 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 PRMT8Q9NR22 394 aaPredicted RBP15.3■□□□□ 0.04
HPS1-202ENST00000338546 CALML5Q9NZT1 146 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 NDUFAF4Q9P032 175 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 RAB23Q9ULC3 237 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 PLCL2Q9UPR0 1127 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 SAMHD1Q9Y3Z3 626 aaKnown RBP15.3■□□□□ 0.04
HPS1-202ENST00000338546 SPAG17Q6Q759 2223 aa15.3■□□□□ 0.04
HPS1-202ENST00000338546 H3BNH8 94 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 CYR61O00622 381 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 DNAJB5O75953 348 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 MFN2O95140 757 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 HMGN2P05204 90 aaKnown RBP15.29■□□□□ 0.04
HPS1-202ENST00000338546 OR12D1P0DN82 309 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 CPMP14384 443 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 PORP16435 677 aaPredicted RBP15.29■□□□□ 0.04
HPS1-202ENST00000338546 CDH2P19022 906 aaPredicted RBP15.29■□□□□ 0.04
HPS1-202ENST00000338546 CRISP3P54108 245 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 RAB38P57729 211 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 RPS26P62854 115 aaKnown RBP15.29■□□□□ 0.04
HPS1-202ENST00000338546 DUSP2Q05923 314 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 FAM53BQ14153 422 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 MAPK11Q15759 364 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 TCTE1Q5JU00 501 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 TMEM107Q6UX40 140 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 CA13Q8N1Q1 262 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 NUP43Q8NFH3 380 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 OR9A2Q8NGT5 310 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 RMND5BQ96G75 393 aaPredicted RBP15.29■□□□□ 0.04
HPS1-202ENST00000338546 MAP3K3Q99759 626 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 SUSD2Q9UGT4 822 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 NAALAD2Q9Y3Q0 740 aa15.29■□□□□ 0.04
HPS1-202ENST00000338546 MAGED1Q9Y5V3 778 aaPredicted RBP15.29■□□□□ 0.04
HPS1-202ENST00000338546 GPC6Q9Y625 555 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms