RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CBSLP0DN79 551 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 PRG2P13727 222 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 NPPBP16860 134 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 POLR2CP19387 275 aaPredicted RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 IGFBP4P22692 258 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 PPIBP23284 216 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 GRPRP30550 384 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CBSP35520 551 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 PIK3CBP42338 1070 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 TGM3Q08188 693 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 TIMM50Q3ZCQ8 353 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 NUDT18Q6ZVK8 323 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 TRIM46Q7Z4K8 759 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 C12orf40Q86WS4 652 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 ZNF671Q8TAW3 534 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 GPR151Q8TDV0 419 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 FAM46AQ96IP4 442 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 UCK2Q9BZX2 261 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 SERHLQ9NQF3 203 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 WSB2Q9NYS7 404 aaPredicted RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 NTNG1Q9Y2I2 539 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CCDC182A6NF36 153 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 OR2W5A6NFC9 320 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 FAM171A2A8MVW0 826 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 OR10H2O60403 315 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 OR5F1O95221 314 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CLEC2LP0C7M8 214 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 PTX3P26022 381 aaPredicted RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 HOXC8P31273 242 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CSTF1Q05048 431 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 KIAA0040Q15053 153 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 NDUFAF5Q5TEU4 345 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 MLIPQ5VWP3 458 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 BORAQ6PGQ7 559 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 PLET1Q6UQ28 207 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 METTL3Q86U44 580 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 GALNT13Q8IUC8 556 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CYP4Z2PQ8N1L4 340 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 TBC1D19Q8N5T2 526 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 PCNPQ8WW12 178 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 UBE2E3Q969T4 207 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 TRIT1Q9H3H1 467 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 EGLN3Q9H6Z9 239 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CXorf36Q9H7Y0 433 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 SLC23A2Q9UGH3 650 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 TMEFF2Q9UIK5 374 aaPredicted RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 ZNF222Q9UK12 451 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 SPATA2Q9UM82 520 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CORO2BQ9UQ03 480 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 AP3M1Q9Y2T2 418 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CARNS1A5YM72 827 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 FAM170BA6NMN3 283 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CLCA1A8K7I4 914 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 H7C0S8 307 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PITPNM1O00562 1244 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PDE9AO76083 593 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 C1orf105O95561 183 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 HMGN2P05204 90 aaKnown RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 HOXB3P14651 431 aaPredicted RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 PVRP15151 417 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PORP16435 677 aaPredicted RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 ALAS2P22557 587 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ITGB8P26012 769 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 MAN2A2P49641 1150 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CCR8P51685 355 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CRISP1P54107 249 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 GPNMBQ14956 572 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 SPHARQ15513 63 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 GPR19Q15760 415 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ZFP69Q49AA0 526 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 C6orf132Q5T0Z8 1188 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CDC73Q6P1J9 531 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 NXPE4Q6UWF7 544 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 LRRTM4Q86VH4 590 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 NUDT13Q86X67 352 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CADM3Q8N126 398 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 AMER3Q8N944 861 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PAPD5Q8NDF8 572 aaKnown RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 OR4K5Q8NGD3 323 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ADAMTS19Q8TE59 1207 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 FAIM2Q9BWQ8 316 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 YTHDF1Q9BYJ9 559 aaKnown RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 SIAEQ9HAT2 523 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 MRPL15Q9P015 296 aaKnown RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 TMEM9Q9P0T7 183 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CHD7Q9P2D1 2997 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 NDRG2Q9UN36 371 aaKnown RBP7.82□□□□□ -1.16
HPS4-201ENST00000336873 POFUT2Q9Y2G5 429 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 TMEM221A6NGB7 291 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 QSOX1O00391 747 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 NUAK1O60285 661 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 HTR1AP08908 422 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 LAMP2P13473 410 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ADRB3P13945 408 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 KELP23276 732 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CHMP24386 653 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CXCR2P25025 360 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 CERS1P27544 350 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 ACVR1BP36896 505 aa7.82□□□□□ -1.16
HPS4-201ENST00000336873 PXNP49023 591 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms