RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SLC7A13Q8TCU3 470 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 ZNF480Q8WV37 535 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 PDXPQ96GD0 296 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 WFDC6Q9BQY6 131 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 VN1R3Q9BXE9 311 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 ZNF334Q9HCZ1 680 aaPredicted RBP22.42■■□□□ 1.18
TSKU-201ENST00000333090 ALG5Q9Y673 324 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 SNRPD2P62316 118 aaKnown RBP22.42■■□□□ 1.18
TSKU-201ENST00000333090 OCLNQ16625 522 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 CEP78Q5JTW2 689 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 Q8N402 240 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 FIBINQ8TAL6 211 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 RIOK2Q9BVS4 552 aaKnown RBP22.42■■□□□ 1.18
TSKU-201ENST00000333090 THSD7BQ9C0I4 1608 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 PIPSLA2A3N6 862 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 ARHGEF9O43307 516 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 UQCRC2P22695 453 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 IRS1P35568 1242 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 BNC1Q01954 994 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 SYT14P1Q58G82 188 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 RNLSQ5VYX0 342 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 Q6ZVU0 165 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 CMTM8Q8IZV2 173 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 FOPNLQ96NB1 174 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 TAAR2Q9P1P5 351 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 CFAP97Q9P2B7 532 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 BACE2Q9Y5Z0 518 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 PDE9AO76083 593 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 CKMP06732 381 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 MYL12AP19105 171 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 HOXD11P31277 338 aaPredicted RBP22.41■■□□□ 1.18
TSKU-201ENST00000333090 GZMKP49863 264 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 SP3Q02447 781 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 SMUG1Q53HV7 270 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 SLC30A8Q8IWU4 369 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 OR4D11Q8NGI4 311 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 DEDD2Q8WXF8 326 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 GATAD2BQ8WXI9 593 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 TM9SF4Q92544 642 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 AP3S1Q92572 193 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 TMEM175Q9BSA9 504 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 SPNS1Q9H2V7 528 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 NLKQ9UBE8 527 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 KLHL21Q9UJP4 597 aa22.41■■□□□ 1.18
TSKU-201ENST00000333090 UNC80Q8N2C7 3258 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 NME6O75414 186 aaPredicted RBP22.4■■□□□ 1.18
TSKU-201ENST00000333090 POP4O95707 220 aaKnown RBP22.4■■□□□ 1.18
TSKU-201ENST00000333090 NPPBP16860 134 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 PIN1Q13526 163 aaPredicted RBP22.4■■□□□ 1.18
TSKU-201ENST00000333090 ZNF628Q5EBL2 1059 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 RASGEF1AQ8N9B8 481 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 TEFMQ96QE5 360 aaKnown RBP22.4■■□□□ 1.18
TSKU-201ENST00000333090 MVB12BQ9H7P6 319 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 FOXE1O00358 373 aaPredicted RBP22.4■■□□□ 1.18
TSKU-201ENST00000333090 AKR7A2O43488 359 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 ABLIM3O94929 683 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 CRYZL1O95825 349 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 NR2F6P10588 404 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 WNT4P56705 351 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 NFE2L1Q14494 772 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 MPPE1Q53F39 396 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 ZNF730Q6ZMV8 503 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 DEFB128Q7Z7B8 93 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 ZNF740Q8NDX6 193 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 KIAA1143Q96AT1 154 aaPredicted RBP22.4■■□□□ 1.18
TSKU-201ENST00000333090 TMEM39AQ9NV64 488 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 DYRK1BQ9Y463 629 aa22.4■■□□□ 1.18
TSKU-201ENST00000333090 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.39■■□□□ 1.18
TSKU-201ENST00000333090 SLC30A4O14863 429 aa22.39■■□□□ 1.18
TSKU-201ENST00000333090 PLK5Q496M5 336 aa22.39■■□□□ 1.18
TSKU-201ENST00000333090 CNIH2Q6PI25 160 aa22.39■■□□□ 1.18
TSKU-201ENST00000333090 AUTS2Q8WXX7 1259 aa22.39■■□□□ 1.18
TSKU-201ENST00000333090 ZBED6CLQ96FA7 236 aaPredicted RBP22.39■■□□□ 1.18
TSKU-201ENST00000333090 RBFOX1Q9NWB1 397 aaKnown RBP22.39■■□□□ 1.18
TSKU-201ENST00000333090 FAM240BA0A1B0GVZ2 78 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 SMLR1H3BR10 107 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 ATG13O75143 517 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 URODP06132 367 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 SELPP16109 830 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 HLA-FP30511 346 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 PNLIPRP1P54315 467 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 GINS1Q14691 196 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 P2RY14Q15391 338 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 BTBD16Q32M84 506 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 LHX8Q68G74 356 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 TYW3Q6IPR3 259 aaKnown RBP22.39■■□□□ 1.17
TSKU-201ENST00000333090 UNC5DQ6UXZ4 953 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 DDX53Q86TM3 631 aaKnown RBP22.39■■□□□ 1.17
TSKU-201ENST00000333090 FAM26EQ8N5C1 309 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 ZFP41Q8N8Y5 198 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 ZNF557Q8N988 423 aaPredicted RBP22.39■■□□□ 1.17
TSKU-201ENST00000333090 SUN5Q8TC36 379 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 TMEM169Q96HH4 297 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 EFCAB11Q9BUY7 163 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 MRPL9Q9BYD2 267 aaKnown RBP22.39■■□□□ 1.17
TSKU-201ENST00000333090 CPEB1Q9BZB8 566 aaKnown RBP22.39■■□□□ 1.17
TSKU-201ENST00000333090 CASP8AP2Q9UKL3 1982 aa22.39■■□□□ 1.17
TSKU-201ENST00000333090 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.38■■□□□ 1.17
TSKU-201ENST00000333090 TP53P04637 393 aaPredicted RBP22.38■■□□□ 1.17
TSKU-201ENST00000333090 C1GALT1C1LP0DN25 315 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms