RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ZNF550Q7Z398 422 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 LRRC56Q8IYG6 542 aaPredicted RBP13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 GCNT2Q8N0V5 402 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 MYO1HQ8N1T3 1032 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 GPATCH11Q8N954 259 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 VPS39Q96JC1 886 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 FAM111AQ96PZ2 611 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 TNFRSF13CQ96RJ3 184 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 TM9SF2Q99805 663 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 PHACTR1Q9C0D0 580 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 ACBD3Q9H3P7 528 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 SAYSD1Q9NPB0 183 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 VWA7Q9Y334 891 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 MMACHCQ9Y4U1 282 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 MALRD1Q5VYJ5 2156 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 MSTNO14793 375 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 PSIP1O75475 530 aaKnown RBP13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 SYF2O95926 243 aaKnown RBP13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 PLAUP00749 431 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 AHSGP02765 367 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 C8GP07360 202 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 HIST1H2AGP0C0S8 130 aaPredicted RBP13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 CTAGE8P0CG41 777 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 HIST1H2ADP20671 130 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 UGT2B10P36537 528 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 IL2P60568 153 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 TBL3Q12788 808 aaKnown RBP13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 CUL1Q13616 776 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 NHSL2Q5HYW2 709 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 DCST1Q5T197 706 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 FAM45BPQ6NSW5 357 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 IL17RELQ6ZVW7 336 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 MILR1Q7Z6M3 343 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 CTAGE4Q8IX94 777 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 FAM45AQ8TCE6 357 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 ZPLD1Q8TCW7 415 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 CD200R1Q8TD46 325 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 PAQR8Q8TEZ7 354 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 ASB11Q8WXH4 323 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 HIST1H2AHQ96KK5 128 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 NDNQ99608 321 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 HIST1H2AJQ99878 128 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 H2AFJQ9BTM1 129 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 UGT2B28Q9BY64 529 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 TSPYL1Q9H0U9 437 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 RHBGQ9H310 441 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 PROK2Q9HC23 129 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 GALPQ9UBC7 116 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 SLC6A5Q9Y345 797 aa13.45□□□□□ -0.26
CTHRC1-201ENST00000330295 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 NDUFS4O43181 175 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 LMX1BO60663 402 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 IGHV4-39P01824 125 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 C1QAP02745 245 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 CYP4B1P13584 511 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 IGFBP5P24593 272 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 SLC12A2P55011 1212 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 EEF1A1P68104 462 aaKnown RBP13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 GAB1Q13480 694 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 SQLEQ14534 574 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 BEX5Q5H9J7 111 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 EEF1A1P5Q5VTE0 462 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 TRMT10BQ6PF06 316 aaKnown RBP13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 UBE2R2Q712K3 238 aaPredicted RBP13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 STRA8Q7Z7C7 330 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 CPNE9Q8IYJ1 553 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 DEPDC4Q8N2C3 294 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 C1orf159Q96HA4 380 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 CLK4Q9HAZ1 481 aaKnown RBP13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 ADAP2Q9NPF8 381 aa13.44□□□□□ -0.26
CTHRC1-201ENST00000330295 PRKDCP78527 4128 aaKnown RBP13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 LRRC14BA6NHZ5 514 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 TGFBR3LH3BV60 316 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 GFYI3L273 518 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 TCF21O43680 179 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 TRAPPC6AO75865 159 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 TNFSF13O75888 250 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 THBS1P07996 1170 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 ZNF888P0CJ79 500 aaPredicted RBP13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 ZNF16P17020 682 aaPredicted RBP13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 CDKN1AP38936 164 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 RNF4P78317 190 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 SP140Q13342 867 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 BMPR2Q13873 1038 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 FASTKD3Q14CZ7 662 aaKnown RBP13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 PHKG1Q16816 387 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 ZNF791Q3KP31 576 aaPredicted RBP13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 GLE1Q53GS7 698 aaKnown RBP13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 C3orf62Q6ZUJ4 267 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 C22orf34Q6ZV56 151 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 CYS1Q717R9 158 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 SCUBE1Q8IWY4 988 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 TMEM132CQ8N3T6 1108 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 MFSD9Q8NBP5 474 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms