RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 RNF186Q9NXI6 227 aa14.05□□□□□ -0.16
TCOF1-201ENST00000323668 EIF3KQ9UBQ5 218 aaKnown RBP14.05□□□□□ -0.16
TCOF1-201ENST00000323668 H0YIV9 168 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 ARL6IP5O75915 188 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 MAT2AP31153 395 aaKnown RBP14.04□□□□□ -0.16
TCOF1-201ENST00000323668 UGT2B10P36537 528 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 LIPAP38571 399 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 CTSCP53634 463 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 TMCO2Q7Z6W1 182 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-201ENST00000323668 NRSN1Q8IZ57 195 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 LMLNQ96KR4 655 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 COMMD9Q9P000 198 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 MARK1Q9P0L2 795 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 KCNK6Q9Y257 313 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 CARD8Q9Y2G2 431 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 VEGFDO43915 354 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 XKRXQ6PP77 449 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 LINGO2Q7L985 606 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-201ENST00000323668 PJA1Q8NG27 643 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 C5AR2Q9P296 337 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 THSD7AQ9UPZ6 1657 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 ASPDHA6ND91 283 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 STK25O00506 426 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 PTHP01270 115 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
TCOF1-201ENST00000323668 CPXM2Q8N436 756 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 WDR48Q8TAF3 677 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 MYEOVQ96EZ4 313 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 ZNF225Q9UK10 706 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 ZFR2Q9UPR6 939 aaKnown RBP14.04□□□□□ -0.16
TCOF1-201ENST00000323668 LIPT1Q9Y234 373 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 PCDHGB7Q9Y5F8 929 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 LRRC37AA6NMS7 1700 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 MYO10Q9HD67 2058 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 OR2A25A4D2G3 310 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 SLC19A2O60779 497 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 MT-ND5P03915 603 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 ZNF3P17036 446 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 ACVR2AP27037 513 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 MNDAP41218 407 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 NFE2L1Q14494 772 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 RFLNAQ6ZTI6 216 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 SAMD12Q8N8I0 201 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 OR2T33Q8NG76 320 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 LRRC20Q8TCA0 184 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 ZNF480Q8WV37 535 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 MOAP1Q96BY2 351 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 RBM18Q96H35 190 aaKnown RBP14.04□□□□□ -0.16
TCOF1-201ENST00000323668 SLC6A16Q9GZN6 736 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 MYNNQ9NPC7 610 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 ITM2BQ9Y287 266 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 HEBP2Q9Y5Z4 205 aa14.04□□□□□ -0.16
TCOF1-201ENST00000323668 CENPBD1B2RD01 187 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 SLC10A3P09131 477 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 TCEA1P23193 301 aaKnown RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 STOMP27105 288 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 BMP8BP34820 402 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 WNT4P56705 351 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 BTBD16Q32M84 506 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 BCL7AQ4VC05 210 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 FAM26DQ5JW98 314 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 DUS1LQ6P1R4 473 aaKnown RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 HTR3DQ70Z44 454 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 BMP8AQ7Z5Y6 402 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 RTN4RL1Q86UN2 441 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 SLITRK4Q8IW52 837 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 VWA5B2Q8N398 1253 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 CELF5Q8N6W0 485 aaKnown RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 OR6K6Q8NGW6 343 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 ZNF431Q8TF32 576 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 NLKQ9UBE8 527 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 NDRG4Q9ULP0 352 aaKnown RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 PPT2Q9UMR5 302 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 PADI2Q9Y2J8 665 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 OR2B3O76000 313 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 DRD2P14416 443 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 CHMP24386 653 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 ELOAQ14241 798 aaKnown RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 ALG1LQ6GMV1 187 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 SLC22A18Q96BI1 424 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 ZNF419Q96HQ0 510 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 ERMAPQ96PL5 475 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 CENPOQ9BU64 300 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 ACSL5Q9ULC5 683 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 A8MU76 341 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 J3KTA2 159 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 PLD2O14939 933 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 FHP07954 510 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 JUNDP17535 347 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 HSF2Q03933 536 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 UBE2UQ5VVX9 321 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 JAZF1Q86VZ6 243 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 XKR8Q9H6D3 395 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 BRD7Q9NPI1 651 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 UCKL1Q9NWZ5 548 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 MED31Q9Y3C7 131 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 A3GALT2U3KPV4 340 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 FEZF1A0PJY2 475 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 SLC35F4A4IF30 521 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms