RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TRAPPC13A5PLN9 417 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 SNHG28P0DPA3 235 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 C14orf28Q4W4Y0 310 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 MAPK15Q8TD08 544 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 DLGAP4Q9Y2H0 992 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 FMO6PO60774 539 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 PTH2RP49190 550 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 AARDQ4LEZ3 155 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 TMPRSS9Q7Z410 1059 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 LILRB2Q8N423 598 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 TMEM151AQ8N4L1 468 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 C3orf58Q8NDZ4 430 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 OR8J1Q8NGP2 316 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 SLC25A44Q96H78 314 aaPredicted RBP16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 ACSL6Q9UKU0 697 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 LIPT1Q9Y234 373 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 SNAPINO95295 136 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 RAC2P15153 192 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 POU6F2P78424 691 aaPredicted RBP16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 ZNF283Q8N7M2 679 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 OR9A1PQ8NGU1 263 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 A8MXE2 369 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 GPR25O00155 361 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 AIPO00170 330 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 HOXA10P31260 410 aaPredicted RBP16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 SLC41A3Q96GZ6 507 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 PPA2Q9H2U2 334 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 ADAM18Q9Y3Q7 739 aa16.19■□□□□ 0.18
SMCHD1-201ENST00000320876 ARHGAP40Q5TG30 622 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 TMEM156Q8N614 296 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 OR51D1Q8NGF3 324 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 CACNG6Q9BXT2 260 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 CDK1P06493 297 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 OC90Q02509 493 aaPredicted RBP16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 CHCHD4Q8N4Q1 142 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 SCAMP5Q8TAC9 235 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 ADAMTS6Q9UKP5 1117 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 NUBP2Q9Y5Y2 271 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 SOCS2O14508 198 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 CLEC3AO75596 197 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 GBAP04062 536 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 HNRNPFP52597 415 aaKnown RBP16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 RIDAP52758 137 aaKnown RBP16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 RSU1Q15404 277 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 MYLK3Q32MK0 819 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 TSPYL5Q86VY4 417 aaPredicted RBP16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 NSUN3Q9H649 340 aaKnown RBP16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 SIX2Q9NPC8 291 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 GNG13Q9P2W3 67 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 GRXCR1A8MXD5 290 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 MMP20O60882 483 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 SPDEFO95238 335 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 ALPIP09923 528 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 GFOD1Q9NXC2 390 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 BCL9LQ86UU0 1499 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 SOX2P48431 317 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 NKX2-5P52952 324 aaPredicted RBP16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 TICAM1Q8IUC6 712 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 SYT14Q8NB59 555 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 SLC35F5Q8WV83 523 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 OARD1Q9Y530 152 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 A8MUA0 341 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 UPK3BL1B0FP48 263 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 UPK3BL2E5RIL1 263 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 RFPL3O75679 317 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 CKMT1AP12532 417 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 CERS1P27544 350 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 LSAMPQ13449 338 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 PLEKHS1Q5SXH7 462 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 TMEM164Q5U3C3 297 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 AGTRAPQ6RW13 159 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 ACOT13Q9NPJ3 140 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 C2orf74A8MZ97 194 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 ZNF254O75437 659 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 PRKCAP17252 672 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 PITPNBP48739 271 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 TAS2R20P59543 309 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 FKBP1BP68106 108 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 PPIGQ13427 754 aaKnown RBP eCLIP16.18■□□□□ 0.187e-7■■■□□ 15.3
SMCHD1-201ENST00000320876 TRIM46Q7Z4K8 759 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 NOXA1Q86UR1 476 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 OR4K14Q8NGD5 310 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 FAM46BQ96A09 425 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 MCHR1Q99705 422 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 SEZ6LQ9BYH1 1024 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 ZBTB20Q9HC78 741 aaPredicted RBP16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 PRODH2Q9UF12 536 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 CYP8B1Q9UNU6 501 aa16.18■□□□□ 0.18
SMCHD1-201ENST00000320876 AK4P27144 223 aaPredicted RBP16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 CDK3Q00526 305 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 NLE1Q9NVX2 485 aaPredicted RBP16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 ACSL5Q9ULC5 683 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 PCYT1BQ9Y5K3 369 aaPredicted RBP16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 F5H5P2 479 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 PRKACBP22694 351 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 NFATC3Q12968 1075 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 PPP1R3AQ16821 1122 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms