RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 DGAT2L6Q6ZPD8 337 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 TRMT10CQ7L0Y3 403 aaKnown RBP16.41■□□□□ 0.22
TPM1-203ENST00000317516 LCA5Q86VQ0 697 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 C9orf40Q8IXQ3 194 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 SRRM1Q8IYB3 904 aaKnown RBP16.41■□□□□ 0.22
TPM1-203ENST00000317516 FAM109AQ8N4B1 249 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 OR4F6Q8NGB9 312 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 OR4K14Q8NGD5 310 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 TRPC4APQ8TEL6 797 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 SDCCAG3Q96C92 435 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 NSUN5Q96P11 429 aaKnown RBP16.41■□□□□ 0.22
TPM1-203ENST00000317516 ZDHHC11Q9H8X9 412 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 ZBTB26Q9HCK0 441 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 NFU1Q9UMS0 254 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 SNX6Q9UNH7 406 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 CELSR2Q9HCU4 2923 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 OR14I1A6ND48 311 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 WASHC1A8K0Z3 465 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 CAPN14A8MX76 684 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 G3V3Y1 287 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 GLSO94925 669 aaPredicted RBP16.4■□□□□ 0.22
TPM1-203ENST00000317516 RPS17P08708 135 aaKnown RBP16.4■□□□□ 0.22
TPM1-203ENST00000317516 TRAF3Q13114 568 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 SLC10A1Q14973 349 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 HYAL4Q2M3T9 481 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 SGO1Q5FBB7 561 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 C6orf163Q5TEZ5 329 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 HLA-DQA1Q5Y7H0 255 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 TIFABQ6ZNK6 161 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 GDF7Q7Z4P5 450 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 TAGAPQ8N103 731 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 SPACA9Q96E40 222 aaPredicted RBP16.4■□□□□ 0.22
TPM1-203ENST00000317516 GAL3ST4Q96RP7 486 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 CNIH4Q9P003 139 aa16.4■□□□□ 0.22
TPM1-203ENST00000317516 HRKO00198 91 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 BCKDKO14874 412 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 PGRMC2O15173 223 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 ZNF354AO60765 605 aaPredicted RBP16.39■□□□□ 0.21
TPM1-203ENST00000317516 CCL3P10147 92 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 PRF1P14222 555 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 TNFRSF8P28908 595 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 MAPK12P53778 367 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 SLC37A1P57057 533 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 ADGRD1Q6QNK2 874 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 METTL4Q8N3J2 472 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 TMEM251Q8N6I4 163 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 PAQR8Q8TEZ7 354 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 ZNF483Q8TF39 744 aaPredicted RBP16.39■□□□□ 0.21
TPM1-203ENST00000317516 ASB5Q8WWX0 329 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 SELENOMQ8WWX9 145 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 RND1Q92730 232 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 C1QTNF3Q9BXJ4 246 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 MRPL1Q9BYD6 325 aaKnown RBP16.39■□□□□ 0.21
TPM1-203ENST00000317516 WWTR1Q9GZV5 400 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 BRF2Q9HAW0 419 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 PSME2Q9UL46 239 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 BOKQ9UMX3 212 aaPredicted RBP16.39■□□□□ 0.21
TPM1-203ENST00000317516 SLC12A4Q9UP95 1085 aa16.39■□□□□ 0.21
TPM1-203ENST00000317516 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.39■□□□□ 0.21
TPM1-203ENST00000317516 MYO9AB2RTY4 2548 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 A0A0G2JMM0 328 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 C2orf92A0A1B0GVN3 265 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 A0A1W2PPB8 328 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 A0A1W2PRS3 328 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 A8MT66 165 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 KIR3DP1A8MWS1 328 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 NPIPA2E9PIF3 369 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 NPIPA3F8WFD2 350 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 SUSD5O60279 629 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 NADKO95544 446 aaPredicted RBP16.38■□□□□ 0.21
TPM1-203ENST00000317516 IGHG3P01860 377 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 SNRPB2P08579 225 aaKnown RBP16.38■□□□□ 0.21
TPM1-203ENST00000317516 FBXO45P0C2W1 286 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 DEKP35659 375 aaKnown RBP16.38■□□□□ 0.21
TPM1-203ENST00000317516 PIGAP37287 484 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 DNASE1L1P49184 302 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 XKP51811 444 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 CDH13P55290 713 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 KCNJ2P63252 427 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 FOXO1Q12778 655 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 EBPQ15125 230 aaKnown RBP16.38■□□□□ 0.21
TPM1-203ENST00000317516 GXYLT1Q4G148 440 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 CRYBG3Q68DQ2 2970 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 NCCRP1Q6ZVX7 275 aaPredicted RBP16.38■□□□□ 0.21
TPM1-203ENST00000317516 ACAD11Q709F0 780 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 GALNT12Q8IXK2 581 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 TMEM151AQ8N4L1 468 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 FAM13CQ8NE31 585 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 DOK4Q8TEW6 326 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 TP53INP1Q96A56 240 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 SMC6Q96SB8 1091 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 LDAHQ9H6V9 325 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 CXorf21Q9HAI6 301 aa16.38■□□□□ 0.21
TPM1-203ENST00000317516 TEX10Q9NXF1 929 aaPredicted RBP16.38■□□□□ 0.21
TPM1-203ENST00000317516 A0A1B0GVC2 190 aa16.37■□□□□ 0.21
TPM1-203ENST00000317516 ATP6AP2A0A1C7CYW4 349 aa16.37■□□□□ 0.21
TPM1-203ENST00000317516 C1orf226A1L170 272 aa16.37■□□□□ 0.21
TPM1-203ENST00000317516 GOLGA6L10A6NI86 522 aa16.37■□□□□ 0.21
TPM1-203ENST00000317516 FIGNL2A6NMB9 653 aa16.37■□□□□ 0.21
TPM1-203ENST00000317516 TP53I11O14683 189 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms