RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 HUNKP57058 714 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 SESN2P58004 480 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 MEF2AQ02078 507 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ADIGQ0VDE8 80 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 SMCO1Q147U7 214 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 LY6KQ17RY6 165 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 PROX2Q3B8N5 592 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 UAP1L1Q3KQV9 507 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 SPDYE7PQ495Y7 208 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 MANEAQ5SRI9 462 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 HECTD2Q5U5R9 776 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ANKS6Q68DC2 871 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 FRMPD2BQ6IN97 320 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 PGAP1Q75T13 922 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ANKRD46Q86W74 232 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 CIR1Q86X95 450 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 TGIF2LXQ8IUE1 241 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 SLC34A3Q8N130 599 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 NKAPQ8N5F7 415 aaKnown RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 OR6B3Q8NGW1 331 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 OR5K1Q8NHB7 308 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 DNAJB14Q8TBM8 379 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 DIRAS2Q96HU8 199 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 C3orf30Q96M34 536 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 SMOQ99835 787 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 SARGQ9BW04 601 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 METTL9Q9H1A3 318 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 RDH14Q9HBH5 336 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 NLE1Q9NVX2 485 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 POMT2Q9UKY4 750 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 BTRCQ9Y297 605 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 CDH10Q9Y6N8 788 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 IQCMA0A1B0GVH7 501 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 A0A1B0GVI7 797 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 WASH3PC4AMC7 463 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 ARVCFO00192 962 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 FFAR3O14843 346 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 GPR42O15529 346 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 TGM5O43548 720 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 NBNO60934 754 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 RGS11O94810 467 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 CSF2RAP15509 400 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 RPS19P39019 145 aaKnown RBP6.34□□□□□ -1.4
ZNF540-201ENST00000316433 RGS19P49795 217 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 RENBPP51606 427 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 CLCN3P51790 818 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 CTSCP53634 463 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 KIAA1024LP59773 190 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 EXOC3L2Q2M3D2 409 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 SEZ6Q53EL9 994 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 KRBOX4Q5JUW0 171 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 AFTPHQ6ULP2 937 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 OR10H5Q8NGA6 315 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 OR14A16Q8NHC5 309 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 OVCA2Q8WZ82 227 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 MRPL38Q96DV4 380 aaKnown RBP6.34□□□□□ -1.4
ZNF540-201ENST00000316433 SCRN2Q96FV2 425 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 ATXN7L3BQ96GX2 97 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 SGIP1Q9BQI5 828 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 ASPNQ9BXN1 380 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 TEX12Q9BXU0 123 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 ABCB9Q9NP78 766 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 OR6C2Q9NZP2 312 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 CLCA2Q9UQC9 943 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 SCML2Q9UQR0 700 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 CA5BQ9Y2D0 317 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 PRKAB1Q9Y478 270 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 CCL27Q9Y4X3 112 aa6.34□□□□□ -1.4
ZNF540-201ENST00000316433 A0A096LPI6 279 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 OR6C68A6NDL8 312 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 M0QYT0 321 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 CD3EAPO15446 510 aaKnown RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 LDB2O43679 373 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 RAD1O60671 282 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 MITFO75030 526 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SEC22BO75396 215 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PRAMEF1O95521 474 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 RAB3DO95716 219 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 HIST1H2AGP0C0S8 130 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SAGP10523 405 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 TXNP10599 105 aaKnown RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SLC2A2P11168 524 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ENGP17813 658 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 HIST1H2ADP20671 130 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 IGFBP5P24593 272 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 C21orf33P30042 268 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SSTR4P31391 388 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 NNMTP40261 264 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PBX3P40426 434 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF140P52738 457 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 VSX2P58304 361 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 CLN3Q13286 438 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PWP1Q13610 501 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 VGLL4Q14135 290 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 DOC2AQ14183 400 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 MBTPS1Q14703 1052 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 NR6A1Q15406 480 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SMAD1Q15797 465 aaKnown RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ATP13A5Q4VNC0 1218 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 CCDC157Q569K6 752 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms