RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 GPR75O95800 540 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 CLPSP04118 112 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 FBXO45P0C2W1 286 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 TLX1P31314 330 aaPredicted RBP16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 MAGEA4P43358 317 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 KCNJ2P63252 427 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 IRF9Q00978 393 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 PLIN5Q00G26 463 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 C2orf54Q08AI8 447 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 SNTB1Q13884 538 aaKnown RBP16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 CCDC25Q86WR0 208 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 MYLK4Q86YV6 388 aaPredicted RBP16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 LRRC25Q8N386 305 aaPredicted RBP16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 FBXW8Q8N3Y1 598 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 FAM13CQ8NE31 585 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 FBXO25Q8TCJ0 367 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 GAL3ST4Q96RP7 486 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 PHF11Q9UIL8 331 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 CNOT11Q9UKZ1 510 aaKnown RBP16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 TSC22D4Q9Y3Q8 395 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 L3MBTL1Q9Y468 752 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 A0A0A6YYD5 115 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 IQANK1A0A1B0GTG1 560 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 HMX2A2RU54 273 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 DYRK3O43781 588 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 PTX3P26022 381 aaPredicted RBP16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 DNAJA1P31689 397 aaKnown RBP16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 BSGP35613 385 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 ART1P52961 327 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 SLC37A1P57057 533 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 PFKFB4Q16877 469 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 SPRED3Q2MJR0 410 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 LIPJQ5W064 366 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 ZDHHC24Q6UX98 284 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 TMEM64Q6YI46 380 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 SEM1Q6ZVN7 128 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 RIT1Q92963 219 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 ART5Q96L15 291 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 WWTR1Q9GZV5 400 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 SLC6A15Q9H2J7 730 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 DDX31Q9H8H2 851 aaKnown RBP16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 ACKR4Q9NPB9 350 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 CNIH4Q9P003 139 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 BOKQ9UMX3 212 aaPredicted RBP16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 ACOT9Q9Y305 439 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 ANGPTL3Q9Y5C1 460 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 PCDHGA11Q9Y5H2 935 aa16.05■□□□□ 0.16
EXOSC4-201ENST00000316052 A0A1W2PS29 197 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 H0YIV9 168 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 OR10H2O60403 315 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 ZWINTO95229 277 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 C2P06681 752 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 CD1EP15812 388 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 SERPINB3P29508 390 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 TRPC1P48995 793 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 NEK2P51955 445 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 ARFIP1P53367 373 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 GUCY2DQ02846 1103 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 SETDB1Q15047 1291 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 EBPQ15125 230 aaKnown RBP16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 NTRK2Q16620 822 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 CPSF6Q16630 551 aaKnown RBP eCLIP16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 SLC25A35Q3KQZ1 300 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 MROH9Q5TGP6 573 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 ARSKQ6UWY0 536 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 RNF111Q6ZNA4 994 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 SLC29A4Q7RTT9 530 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 WDR53Q7Z5U6 358 aaPredicted RBP16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 ULK2Q8IYT8 1036 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 RHEBL1Q8TAI7 183 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 NEIL3Q8TAT5 605 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 JSRP1Q96MG2 331 aaPredicted RBP16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 CENPKQ9BS16 269 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 ACTR8Q9H981 624 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 RNF11Q9Y3C5 154 aa16.04■□□□□ 0.16
EXOSC4-201ENST00000316052 SYCE1LA8MT33 242 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 KDM4EB2RXH2 506 aaPredicted RBP16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 PGRMC2O15173 223 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 CTAG2O75638 210 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 GBAP04062 536 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 FAM58BPP0C7Q3 252 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 GABRA1P14867 456 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 SSTR4P31391 388 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 STX2P32856 288 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 BUD31P41223 144 aaPredicted RBP16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 IST1P53990 364 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 TBL3Q12788 808 aaKnown RBP16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 RIPPLY2Q5TAB7 128 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 ZZZ3Q8IYH5 903 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 DND1Q8IYX4 353 aaKnown RBP16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 ZNF441Q8N8Z8 693 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 WDR20Q8TBZ3 569 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 MRRFQ96E11 262 aaKnown RBP16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 GPR78Q96P69 363 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 IPPKQ9H8X2 491 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 SLC24A3Q9HC58 644 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 LYARQ9NX58 379 aaKnown RBP16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 KIAA1549Q9HCM3 1950 aa16.03■□□□□ 0.16
EXOSC4-201ENST00000316052 FLNAP21333 2647 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms