RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RNF149Q8NC42 400 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 PPTC7Q8NI37 304 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 SHC3Q92529 594 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 TUBA1CQ9BQE3 449 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 RHOXF2Q9BQY4 288 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 PKD2L2Q9NZM6 624 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 ZDHHC2Q9UIJ5 367 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 TRIM17Q9Y577 477 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 COL1A2P08123 1366 aa3.66□□□□□ -1.82
SMCO3-201ENST00000316048 A0A0B4J203 849 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 LOC101059948A0A1B0GTJ6 334 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 KRT87PA6NCN2 255 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 ANKRD61A6NGH8 418 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 INO80B-WBP1J3KQ70 363 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 OGTO15294 1046 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 ACSL4O60488 711 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 LGALS2P05162 132 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 PNMA6AP0CW24 399 aaPredicted RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 KRT5P13647 590 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 CYP11B1P15538 503 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 CYP2A7P20853 494 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 RABIFP47224 123 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 NLRP11P59045 1033 aaKnown RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 NANOS2P60321 138 aaKnown RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 CDR2Q01850 454 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 EEF1A2Q05639 463 aaKnown RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 KYAT1Q16773 422 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 PHKG1Q16816 387 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 SGSM1Q2NKQ1 1148 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF789Q5FWF6 425 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 PM20D1Q6GTS8 502 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 ASPGQ86U10 573 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 WDR49Q8IV35 697 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 SMYD1Q8NB12 490 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 NOA1Q8NC60 698 aaKnown RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 SPATA4Q8NEY3 305 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 SLC24A4Q8NFF2 622 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 PHLDA1Q8WV24 401 aaPredicted RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 UBLCP1Q8WVY7 318 aaPredicted RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 TSACCQ96A04 125 aaPredicted RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 RBM41Q96IZ5 413 aaKnown RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 RUNDC3BQ96NL0 473 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 RASL10BQ96S79 203 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 SYT11Q9BT88 431 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 NFKBIZQ9BYH8 718 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 OR2B2Q9GZK3 357 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 AKIRIN1Q9H9L7 192 aaPredicted RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 MRPL17Q9NRX2 175 aaKnown RBP3.65□□□□□ -1.82
SMCO3-201ENST00000316048 LCTP09848 1927 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 DOCK5Q9H7D0 1870 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 ARID2Q68CP9 1835 aa3.65□□□□□ -1.82
SMCO3-201ENST00000316048 WDR81Q562E7 1941 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 C13orf42A0A1B0GVH6 325 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 PLSCR5A0PG75 271 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 MIF4GDA9UHW6 222 aaKnown RBP3.65□□□□□ -1.83
SMCO3-201ENST00000316048 E5RGE8 158 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 OAZ2O95190 189 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 SNAI1O95863 264 aaPredicted RBP3.65□□□□□ -1.83
SMCO3-201ENST00000316048 MOCS2O96007 188 aaPredicted RBP3.65□□□□□ -1.83
SMCO3-201ENST00000316048 HLA-DRAP01903 254 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 TNNC2P02585 160 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 C9P02748 559 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 IGKV2-30P06310 120 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 DAOP14920 347 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 HADHBP55084 474 aaKnown RBP3.65□□□□□ -1.83
SMCO3-201ENST00000316048 HUNKP57058 714 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 YWHAEP62258 255 aaKnown RBP3.65□□□□□ -1.83
SMCO3-201ENST00000316048 TNNC1P63316 161 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 CACNG1Q06432 222 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 DRP2Q13474 957 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 GRB14Q14449 540 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 RBBP7Q16576 425 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 GPR33Q49SQ1 333 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 ATF7IP2Q5U623 682 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 TAF3Q5VWG9 929 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 KCTD11Q693B1 232 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 OR4C11Q6IEV9 310 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 ISLR2Q6UXK2 745 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 SLC47A2Q86VL8 602 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 IFT20Q8IY31 132 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 KLHDC8AQ8IYD2 350 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 KRT222Q8N1A0 295 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 UBL4BQ8N7F7 174 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 OR52E1Q8NGJ3 308 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 ACTRT1Q8TDG2 376 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 TBC1D31Q96DN5 1066 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 ALG14Q96F25 216 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 MED30Q96HR3 178 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 PSMB7Q99436 277 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 NAP1L3Q99457 506 aaPredicted RBP3.65□□□□□ -1.83
SMCO3-201ENST00000316048 MAP3K3Q99759 626 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 ZPBPQ9BS86 351 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 TRMT61BQ9BVS5 477 aaKnown RBP3.65□□□□□ -1.83
SMCO3-201ENST00000316048 THAP2Q9H0W7 228 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 RPF1Q9H9Y2 349 aaKnown RBP3.65□□□□□ -1.83
SMCO3-201ENST00000316048 SPHK1Q9NYA1 384 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 NSG2Q9Y328 171 aa3.65□□□□□ -1.83
SMCO3-201ENST00000316048 CNTNAP2Q9UHC6 1331 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ILVBLA1L0T0 632 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms