RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 PCDHGA8Q9Y5G5 932 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 HEBP2Q9Y5Z4 205 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 SUV39H1O43463 412 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 HYAL3O43820 417 aaPredicted RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 BCAS1O75363 584 aaPredicted RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 UBXN7O94888 489 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 C7P10643 843 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 NME1P15531 152 aaKnown RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CXCL12P48061 93 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 DSTNP60981 165 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 INTS11Q5TA45 600 aaKnown RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 KRT80Q6KB66 452 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 SLC48A1Q6P1K1 146 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 PRR23BQ6ZRT6 265 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CCDC71Q8IV32 467 aaPredicted RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 PRSS58Q8IYP2 241 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 CSNK1A1LQ8N752 337 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 ZNF681Q96N22 645 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 TREX2Q9BQ50 279 aaPredicted RBP6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 C9orf16Q9BUW7 83 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 RAB11FIP5Q9BXF6 653 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 NLNQ9BYT8 704 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 RIBC2Q9H4K1 309 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 DNAJB9Q9UBS3 223 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 ZNF639Q9UID6 485 aa6.59□□□□□ -1.35
LYSMD3-201ENST00000315948 SPTBN2O15020 2390 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 XPNPEP2O43895 674 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 FABP3P05413 133 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 SLC35G6P0C7Q6 338 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 UMPSP11172 480 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 CLCN2P51788 898 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 BTG2P78543 158 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 DAG1Q14118 895 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 SAXO2Q658L1 398 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 ZBTB46Q86UZ6 589 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 FAM9CQ8IZT9 166 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 RCBTB1Q8NDN9 531 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 RELTQ969Z4 430 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 COL21A1Q96P44 957 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 NIPSNAP1Q9BPW8 284 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 SPRTNQ9H040 489 aaPredicted RBP6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 CHRDQ9H2X0 955 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 AMBNQ9NP70 447 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 IRAK4Q9NWZ3 460 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 MKLN1Q9UL63 735 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 ATXN7L1Q9ULK2 861 aaPredicted RBP6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 RNF215Q9Y6U7 377 aa6.59□□□□□ -1.36
LYSMD3-201ENST00000315948 SLC28A2O43868 658 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 ZNF217O75362 1048 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 TFPTP0C1Z6 253 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 CPN2P22792 545 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 AHRP35869 848 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 MASP1P48740 699 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 DHPSP49366 369 aaPredicted RBP6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 XKP51811 444 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 BIRC2Q13490 618 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 KIR2DS3Q14952 304 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 NADK2Q4G0N4 442 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 TMEM236Q5W0B7 351 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 OR2T5Q6IEZ7 315 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 EIF3MQ7L2H7 374 aaKnown RBP6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 ZCCHC7Q8N3Z6 543 aaKnown RBP6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 OR2T29Q8NH02 315 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 PIK3R3Q92569 461 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 TM4SF19Q96DZ7 209 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 NR1H4Q96RI1 486 aaPredicted RBP6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 OSBPL11Q9BXB4 747 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 ANKRD60Q9BZ19 345 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 RASSF1Q9NS23 344 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 POT1Q9NUX5 634 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 THUMPD1Q9NXG2 353 aaKnown RBP6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 TSC22D4Q9Y3Q8 395 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 TMEM131Q92545 1883 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 ALPK2Q86TB3 2170 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 C2orf74A8MZ97 194 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 AQP9O43315 295 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 GIMD1P0DJR0 217 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 UQCRC2P22695 453 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 PCGF2P35227 344 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 MAGEA2P43356 314 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 ALDH3A2P51648 485 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 EFNA3P52797 238 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 RACK1P63244 317 aaKnown RBP6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 SELENOWP63302 87 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 ABATP80404 500 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 PIN1Q13526 163 aaPredicted RBP6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 RAPSNQ13702 412 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 CWF19L1Q69YN2 538 aaKnown RBP6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 SHISA6Q6ZSJ9 500 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 MSANTD1Q6ZTZ1 278 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 IKBIPQ70UQ0 350 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 ZAR1Q86SH2 424 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 SPEM1Q8N4L4 309 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 SLC9A6Q92581 669 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 GTPBP3Q969Y2 492 aaKnown RBP6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 TBC1D20Q96BZ9 403 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 NEURL3Q96EH8 262 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 PEX11GQ96HA9 241 aa6.58□□□□□ -1.36
LYSMD3-201ENST00000315948 METTL2AQ96IZ6 378 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms