RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 BBS4Q96RK4 519 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 ASPSCR1Q9BZE9 553 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 ULBP3Q9BZM4 244 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 PAIP1Q9H074 479 aaKnown RBP15.16■□□□□ 0.02
TUBB3-201ENST00000315491 MKKSQ9NPJ1 570 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-201ENST00000315491 PRTFDC1Q9NRG1 225 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 ACSS1Q9NUB1 689 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-201ENST00000315491 SATB2Q9UPW6 733 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 FAM186AA6NE01 2351 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 SMIM31A0A1B0GVY4 71 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 A0A1W2PS29 197 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 FXYD1O00168 92 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 MEN1O00255 615 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 CLDN4O14493 209 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 FGF17O60258 216 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 LDB3O75112 727 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 ERN1O75460 977 aaKnown RBP15.16■□□□□ 0.02
TUBB3-201ENST00000315491 CDC123O75794 336 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-201ENST00000315491 GPR75O95800 540 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 NPPAP01160 153 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 AGXTP21549 392 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 PPP2R1BP30154 601 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 FEN1P39748 380 aaKnown RBP15.16■□□□□ 0.02
TUBB3-201ENST00000315491 CDKN2CP42773 168 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 XKP51811 444 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 MANFP55145 182 aaKnown RBP15.16■□□□□ 0.02
TUBB3-201ENST00000315491 FOLH1Q04609 750 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 DNAL1Q4LDG9 190 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 LRIF1Q5T3J3 769 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 MED25Q71SY5 747 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 ZC3H7AQ8IWR0 971 aaKnown RBP15.16■□□□□ 0.02
TUBB3-201ENST00000315491 PGAM4Q8N0Y7 254 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 OR4A15Q8NGL6 344 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 WDR60Q8WVS4 1066 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 ANKRD9Q96BM1 317 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-201ENST00000315491 PPP1R14BQ96C90 147 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 GLIPR2Q9H4G4 154 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 PCDHGB4Q9UN71 923 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 PCDHGA3Q9Y5H0 932 aa15.16■□□□□ 0.02
TUBB3-201ENST00000315491 FAM149AA5PLN7 773 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 CTNSO60931 367 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 JRKO75564 520 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 BMP10O95393 424 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 GSNP06396 782 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 ANPEPP15144 967 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 NCBP2P52298 156 aaKnown RBP eCLIP15.15■□□□□ 0.02
TUBB3-201ENST00000315491 PSME3P61289 254 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 HBA1P69905 142 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 ID2Q02363 134 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 DUSP2Q05923 314 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 SLC13A2Q13183 592 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 MAP7Q14244 749 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 CAPRIN1Q14444 709 aaKnown RBP15.15■□□□□ 0.02
TUBB3-201ENST00000315491 MLC1Q15049 377 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 C8orf82Q6P1X6 216 aaPredicted RBP15.15■□□□□ 0.02
TUBB3-201ENST00000315491 CCDC116Q8IYX3 515 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 DEFB107AQ8IZN7 70 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 ZFP28Q8NHY6 868 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 AMDHD1Q96NU7 426 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 HOPXQ9BPY8 73 aaPredicted RBP15.15■□□□□ 0.02
TUBB3-201ENST00000315491 SLC39A3Q9BRY0 314 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 LANCL2Q9NS86 450 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 ZNF282Q9UDV7 671 aaPredicted RBP15.15■□□□□ 0.02
TUBB3-201ENST00000315491 ERVK-11Q9UQG0 969 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 GVINP1Q7Z2Y8 2422 aa15.15■□□□□ 0.02
TUBB3-201ENST00000315491 C9orf172C9J069 976 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 KLK3P07288 261 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-201ENST00000315491 ABCB1P08183 1280 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-201ENST00000315491 CPMP14384 443 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 HOXB9P17482 250 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-201ENST00000315491 MPIP34949 423 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 HSD17B7P56937 341 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 HSPB3Q12988 150 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 GTDC1Q4AE62 458 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 VWA2Q5GFL6 755 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 TMEM164Q5U3C3 297 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 ZNF551Q7Z340 670 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-201ENST00000315491 SCUBE1Q8IWY4 988 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 MSRB3Q8IXL7 192 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 LRRC25Q8N386 305 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-201ENST00000315491 GOT1L1Q8NHS2 421 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-201ENST00000315491 SUN3Q8TAQ9 357 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 CGREF1Q99674 301 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 DPH2Q9BQC3 489 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-201ENST00000315491 GPATCH1Q9BRR8 931 aaKnown RBP15.14■□□□□ 0.01
TUBB3-201ENST00000315491 OCEL1Q9H607 264 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 SLC6A13Q9NSD5 602 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 DLL3Q9NYJ7 618 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 TAS2R9Q9NYW1 312 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 VAPAQ9P0L0 249 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 IFT80Q9P2H3 777 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-201ENST00000315491 CTSFQ9UBX1 484 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 MMACHCQ9Y4U1 282 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 PCDHB14Q9Y5E9 798 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 PCDHGA7Q9Y5G6 932 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 WDR87Q6ZQQ6 2873 aa15.14■□□□□ 0.01
TUBB3-201ENST00000315491 IGLV3-12A0A075B6K2 115 aa15.13■□□□□ 0.01
TUBB3-201ENST00000315491 STK17BO94768 372 aa15.13■□□□□ 0.01
TUBB3-201ENST00000315491 ZCCHC18P0CG32 403 aa15.13■□□□□ 0.01
TUBB3-201ENST00000315491 PORP16435 677 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms