RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TRPC4Q9UBN4 977 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 DAPP1Q9UN19 280 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 TMEM247A6NEH6 219 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 UBXN7O94888 489 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 FHP07954 510 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 ST6GAL1P15907 406 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 ITGA2P17301 1181 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 IGFBP5P24593 272 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 RRM2P31350 389 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 CXCL12P48061 93 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 DAPP51397 102 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 NXPH1P58417 271 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 NADK2Q4G0N4 442 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 CYP27C1Q4G0S4 372 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 KLHL35Q6PF15 583 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 CSNK1A1LQ8N752 337 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 OR56A1Q8NGH5 318 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 OR5D16Q8NGK9 328 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 XAGE5Q8WWM1 108 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF300Q96RE9 604 aaPredicted RBP20.04■□□□□ 0.8
ATG4D-201ENST00000309469 PRDM6Q9NQX0 595 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 MS4A12Q9NXJ0 267 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 P2RX2Q9UBL9 471 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF451Q9Y4E5 1061 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 EMC8O43402 210 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 PDE9AO76083 593 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 BCKDHBP21953 392 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 TLX1P31314 330 aaPredicted RBP20.04■□□□□ 0.8
ATG4D-201ENST00000309469 PIGAP37287 484 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 KHKP50053 298 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 KDM4DQ6B0I6 523 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 OR9A2Q8NGT5 310 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 ELP4Q96EB1 424 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 UCK1Q9HA47 277 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 FAM60AQ9NP50 221 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 SH3GLB1Q9Y371 365 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 SLC22A7Q9Y694 548 aa20.04■□□□□ 0.8
ATG4D-201ENST00000309469 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 PRAMEF27A3QJZ7 478 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 ADAMDEC1O15204 470 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 SLC28A2O43868 658 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 MITFO75030 526 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-201ENST00000309469 MFN2O95140 757 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 HMGN2P05204 90 aaKnown RBP20.03■□□□□ 0.8
ATG4D-201ENST00000309469 DCNP07585 359 aaKnown RBP20.03■□□□□ 0.8
ATG4D-201ENST00000309469 CDH3P22223 829 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 ANXA11P50995 505 aaKnown RBP20.03■□□□□ 0.8
ATG4D-201ENST00000309469 VSX2P58304 361 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-201ENST00000309469 PRR5P85299 388 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 SIM2Q14190 667 aaPredicted RBP20.03■□□□□ 0.8
ATG4D-201ENST00000309469 SYPL1Q16563 259 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 DUSP7Q16829 419 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 CNPY1Q3B7I2 92 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 UBALD2Q8IYN6 164 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 TMEFF1Q8IYR6 380 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 CSF3RQ99062 836 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 CCDC3Q9BQI4 270 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 YTHDF1Q9BYJ9 559 aaKnown RBP20.03■□□□□ 0.8
ATG4D-201ENST00000309469 C3orf14Q9HBI5 128 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 LYRM4Q9HD34 91 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 PRDM9Q9NQV7 894 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 SIT1Q9Y3P8 196 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 TESMINQ9Y4I5 508 aa20.03■□□□□ 0.8
ATG4D-201ENST00000309469 LOC100130705A0A1B0GUX0 176 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 TRIM64A6NGJ6 449 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 K7ESF4 209 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 AQP9O43315 295 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 CD247P20963 164 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 HNRNPKP61978 463 aaKnown RBP eCLIP20.02■□□□□ 0.8
ATG4D-201ENST00000309469 OLR1P78380 273 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 THAP5Q7Z6K1 395 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 GALNT5Q7Z7M9 940 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 SAMD14Q8IZD0 417 aaPredicted RBP20.02■□□□□ 0.8
ATG4D-201ENST00000309469 C8orf59Q8N0T1 100 aaPredicted RBP20.02■□□□□ 0.8
ATG4D-201ENST00000309469 DEFB123Q8N688 67 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 PIK3C3Q8NEB9 887 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 OR4K14Q8NGD5 310 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.02■□□□□ 0.8
ATG4D-201ENST00000309469 TMEM74BQ9NUR3 256 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 THEGQ9P2T0 379 aa20.02■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF860A6NHJ4 632 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 TNFRSF11BO00300 401 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 SLC16A6O15403 523 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 HCRTR1O43613 425 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 OR6B1O95007 311 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 NR2F1P10589 423 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 POLR2IP36954 125 aaKnown RBP20.02■□□□□ 0.79
ATG4D-201ENST00000309469 MC3RP41968 323 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 YAP1P46937 504 aaKnown RBP20.02■□□□□ 0.79
ATG4D-201ENST00000309469 XKP51811 444 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 TUBA4AP68366 448 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 SIM1P81133 766 aaPredicted RBP20.02■□□□□ 0.79
ATG4D-201ENST00000309469 LASP1Q14847 261 aaKnown RBP20.02■□□□□ 0.79
ATG4D-201ENST00000309469 PRSS41Q7RTY9 318 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 C17orf82Q86X59 251 aaPredicted RBP20.02■□□□□ 0.79
ATG4D-201ENST00000309469 LRRC25Q8N386 305 aaPredicted RBP20.02■□□□□ 0.79
ATG4D-201ENST00000309469 C19orf47Q8N9M1 422 aaKnown RBP20.02■□□□□ 0.79
ATG4D-201ENST00000309469 MIPOL1Q8TD10 442 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 ZNF607Q96SK3 696 aa20.02■□□□□ 0.79
ATG4D-201ENST00000309469 SLC38A3Q99624 504 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms