RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 RNF111Q6ZNA4 994 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 SEM1Q6ZVN7 128 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 SLC29A4Q7RTT9 530 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 ISCA2Q86U28 154 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 GPR180Q86V85 440 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 MYLK4Q86YV6 388 aaPredicted RBP11.2□□□□□ -0.62
TPT1-201ENST00000309246 CTAGE3PQ8IX95 158 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 ULK2Q8IYT8 1036 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 LRRC25Q8N386 305 aaPredicted RBP11.2□□□□□ -0.62
TPT1-201ENST00000309246 LIX1Q8N485 282 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 SLC15A4Q8N697 577 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 HUS1BQ8NHY5 278 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 NEIL3Q8TAT5 605 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 STAG3L4Q8TBR4 150 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 UBTD2Q8WUN7 234 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 RGMAQ96B86 450 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 POM121Q96HA1 1249 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 ATOH8Q96SQ7 321 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 MTERF1Q99551 399 aaKnown RBP11.2□□□□□ -0.62
TPT1-201ENST00000309246 WWTR1Q9GZV5 400 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 DMRT3Q9NQL9 472 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.2□□□□□ -0.62
TPT1-201ENST00000309246 MS4A12Q9NXJ0 267 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 CRIM1Q9NZV1 1036 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 B4GALT7Q9UBV7 327 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 PHF11Q9UIL8 331 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 CNOT11Q9UKZ1 510 aaKnown RBP11.2□□□□□ -0.62
TPT1-201ENST00000309246 SAR1BQ9Y6B6 198 aa11.2□□□□□ -0.62
TPT1-201ENST00000309246 SETD2Q9BYW2 2564 aaPredicted RBP11.2□□□□□ -0.62
TPT1-201ENST00000309246 ABCA4P78363 2273 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 MED12Q93074 2177 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 IQANK1A0A1B0GTG1 560 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 GLOD5A6NK44 160 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 HSPB2A8KAH6 182 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 FAM47E-STBD1D6RA91 191 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 OR10H2O60403 315 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 FBXO45P0C2W1 286 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 SLC35E2BP0CK96 405 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 GDF1P27539 372 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 SERPINB3P29508 390 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 TLX1P31314 330 aaPredicted RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 SPRP35270 261 aaPredicted RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 BUD31P41223 144 aaPredicted RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 PAFAH1B1P43034 410 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 KIR2DL3P43628 341 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 GPX6P59796 221 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 RPS13P62277 151 aaKnown RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 TBL3Q12788 808 aaKnown RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 CALCOCO2Q13137 446 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 EBPQ15125 230 aaKnown RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 CEBPEQ15744 281 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 HSPB2Q16082 182 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 TMEM64Q6YI46 380 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 RAPH1Q70E73 1250 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 TGIF2LYQ8IUE0 185 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 ST13P4Q8IZP2 240 aaPredicted RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 ZCCHC7Q8N3Z6 543 aaKnown RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 TEX9Q8N6V9 391 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 PPM1NQ8N819 430 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 NAXEQ8NCW5 288 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 C7orf57Q8NEG2 295 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 TNIP2Q8NFZ5 429 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 TANKQ92844 425 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 NINJ1Q92982 152 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 NAPGQ99747 312 aaPredicted RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 FOXC2Q99958 501 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 CENPKQ9BS16 269 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 DOHHQ9BU89 302 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 CXXC4Q9H2H0 198 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 CLEC4MQ9H2X3 399 aaPredicted RBP11.19□□□□□ -0.62
TPT1-201ENST00000309246 NMRAL1Q9HBL8 299 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 ACKR4Q9NPB9 350 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 IGSF5Q9NSI5 407 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 QPCTLQ9NXS2 382 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 CNIH4Q9P003 139 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 ST6GALNAC2Q9UJ37 374 aa11.19□□□□□ -0.62
TPT1-201ENST00000309246 C15orf38-AP3S2A0A0A6YYH1 394 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 LRRC14BA6NHZ5 514 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 EIF3HO15372 352 aaKnown RBP eCLIP11.18□□□□□ -0.62
TPT1-201ENST00000309246 PROM1O43490 865 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 TMPRSS11DO60235 418 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 KERAO60938 352 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 EEDO75530 441 aaKnown RBP11.18□□□□□ -0.62
TPT1-201ENST00000309246 GPR75O95800 540 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 CLPSP04118 112 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 LTA4HP09960 611 aaKnown RBP11.18□□□□□ -0.62
TPT1-201ENST00000309246 NR2F6P10588 404 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 EPB42P16452 691 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 BMP5P22003 454 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 PIK3CBP42338 1070 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 ASCL1P50553 236 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 SLC37A1P57057 533 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 PCDH1Q08174 1060 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 DUSP8Q13202 625 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 BIKQ13323 160 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 NTRK2Q16620 822 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 SPRED3Q2MJR0 410 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 KRTAP21-3Q3LHN1 58 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 KBTBD12Q3ZCT8 623 aa11.18□□□□□ -0.62
TPT1-201ENST00000309246 ACSF3Q4G176 576 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms