RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 FUOMA2VDF0 154 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 C2orf81A6NN90 581 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PRAMEF26H0Y7S4 382 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 H3BMM5 538 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 J3KR12 359 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 K7ENP7 123 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ACOT7O00154 380 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SLC28A1O00337 649 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ANKRD28O15084 1053 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SCAMP1O15126 338 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SLC22A1O15245 554 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SLC28A2O43868 658 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 COQ9O75208 318 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SERPINB7O75635 380 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SIX3O95343 332 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ZBTB11O95625 1053 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SNAP29O95721 258 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 TSPAN12O95859 305 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 OTCP00480 354 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 IL6P05231 212 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 UGT2B4P06133 528 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 OCM2P0CE71 109 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 OCMP0CE72 109 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ITGAMP11215 1152 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SRCP12931 536 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 NELFEP18615 380 aaKnown RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 UGT1A6P19224 532 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 WT1P19544 449 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 LPOP22079 712 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 UGT1A1P22309 533 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 UGT1A4P22310 534 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ACVR2AP27037 513 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 AKT1P31749 480 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 UGT1A3P35503 534 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 UGT1A5P35504 534 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 BMXP51813 675 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 RAD23AP54725 363 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 DIO3P55073 304 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 FOXA1P55317 472 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 OR4D2P58180 307 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ERVPABLB-1P60509 514 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 IL2P60568 153 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 GPR85P60893 370 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 UFM1P61960 85 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PPP2R2BQ00005 443 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 RELAQ04206 551 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 DBPQ10586 325 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 EIF2B5Q13144 721 aaKnown RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 CBX3Q13185 183 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 CAPRIN1Q14444 709 aaKnown RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 GRM7Q14831 915 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 KIAA0040Q15053 153 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 TSNQ15631 228 aaKnown RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 CDKN3Q16667 212 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 RGS21Q2M5E4 152 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SETMARQ53H47 684 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ALFQ53S48 1182 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 RABL3Q5HYI8 236 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 C3orf38Q5JPI3 329 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 FGD3Q5JSP0 725 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ATG9BQ674R7 924 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 XAF1Q6GPH4 301 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SULT1C3Q6IMI6 304 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 C16orf87Q6PH81 154 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 INO80CQ6PI98 192 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 CERS6Q6ZMG9 384 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 Q6ZSR9 355 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 MSANTD1Q6ZTZ1 278 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ADAMTSL2Q86TH1 951 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PIM3Q86V86 326 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 HORMAD1Q86X24 394 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 GPSM1Q86YR5 675 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 EID3Q8N140 333 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PARP8Q8N3A8 854 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PGBD5Q8N414 524 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SETD9Q8NE22 299 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 OR2A12Q8NGT7 310 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 OR5K1Q8NHB7 308 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 DNAJB14Q8TBM8 379 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 IFI44Q8TCB0 444 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 MAGEE2Q8TD90 523 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 KCNE4Q8WWG9 221 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 OR8D1Q8WZ84 308 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 TANKQ92844 425 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 MUL1Q969V5 352 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 TMBIM1Q969X1 311 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 FKBP10Q96AY3 582 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 MED8Q96G25 268 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 FBXL20Q96IG2 436 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 RNF145Q96MT1 663 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF641Q96N77 438 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF583Q96ND8 569 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 MUS81Q96NY9 551 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 DEPDC7Q96QD5 511 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ZBTB18Q99592 522 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SEMA3CQ99985 751 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 PSD2Q9BQI7 771 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 HGH1Q9BTY7 390 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 MROQ9BYG7 248 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 LIN28AQ9H9Z2 209 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms