RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 UBE2UQ5VVX9 321 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 HORMAD2Q8N7B1 307 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 BCL7BQ9BQE9 202 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 OSGIN1Q9UJX0 560 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 ICKQ9UPZ9 632 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 TMA7Q9Y2S6 64 aaKnown RBP20.8■□□□□ 0.92
TPM4-201ENST00000300933 GMPPBQ9Y5P6 360 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 SCN2AQ99250 2005 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 A0A1W2PS29 197 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 CAPN5O15484 640 aaPredicted RBP20.8■□□□□ 0.92
TPM4-201ENST00000300933 ACSL1P33121 698 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 BCL6P41182 706 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 CASP3P42574 277 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 ITGA1P56199 1179 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 DUSP7Q16829 419 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 ZNF793Q6ZN11 406 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 AHSA2Q719I0 299 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 LSRQ86X29 649 aaPredicted RBP20.8■□□□□ 0.92
TPM4-201ENST00000300933 OR4E2Q8NGC2 313 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 DUSP21Q9H596 190 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 TBC1D29Q9UFV1 150 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 MAPRE3Q9UPY8 281 aa20.8■□□□□ 0.92
TPM4-201ENST00000300933 ARHGEF17Q96PE2 2063 aaPredicted RBP20.79■□□□□ 0.92
TPM4-201ENST00000300933 RGS10O43665 173 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 DYRK3O43781 588 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 ALOX12P18054 663 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 CTHP32929 405 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 SDE2Q6IQ49 451 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 TRIM40Q6P9F5 258 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 ENPP7Q6UWV6 458 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 CCDC71Q8IV32 467 aaPredicted RBP20.79■□□□□ 0.92
TPM4-201ENST00000300933 FLCNQ8NFG4 579 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 ZNF566Q969W8 418 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 RSPO3Q9BXY4 272 aaPredicted RBP20.79■□□□□ 0.92
TPM4-201ENST00000300933 PELI2Q9HAT8 420 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 HAT1O14929 419 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 GUCY1B2O75343 617 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 SSR2P43308 183 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 LRRC74AQ0VAA2 488 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 ADAM15Q13444 863 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 TP53BP2Q13625 1128 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 ZNF404Q494X3 552 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 C10orf62Q5T681 223 aaPredicted RBP20.79■□□□□ 0.92
TPM4-201ENST00000300933 KIAA1324Q6UXG2 1013 aaKnown RBP20.79■□□□□ 0.92
TPM4-201ENST00000300933 TMEM184AQ6ZMB5 413 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 USP43Q70EL4 1123 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 OR8K5Q8NH50 307 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 SIPA1Q96FS4 1042 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 FEVQ99581 238 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 DPH7Q9BTV6 452 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 NLNQ9BYT8 704 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 SLC17A4Q9Y2C5 497 aa20.79■□□□□ 0.92
TPM4-201ENST00000300933 DNMT3AQ9Y6K1 912 aaPredicted RBP20.79■□□□□ 0.92
TPM4-201ENST00000300933 SDK1Q7Z5N4 2213 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 CCNKO75909 580 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 VIPP01282 170 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 BCHEP06276 602 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 CXCR2P25025 360 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 RAB8AP61006 207 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 SNRPNP63162 240 aaKnown RBP20.78■□□□□ 0.92
TPM4-201ENST00000300933 SPIBQ01892 262 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 TEAD4Q15561 434 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 SPDYE7PQ495Y7 208 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 LACC1Q8IV20 430 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 PROX1Q92786 737 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 SLC6A20Q9NP91 592 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 PCDHGA3Q9Y5H0 932 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 TNFRSF11BO00300 401 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 C8orf89P0DMQ9 161 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 EEF1A2Q05639 463 aaKnown RBP20.78■□□□□ 0.92
TPM4-201ENST00000300933 RPE65Q16518 533 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 CELF2-AS1Q8N7Q2 184 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 RGMAQ96B86 450 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 YIPF4Q9BSR8 244 aa20.78■□□□□ 0.92
TPM4-201ENST00000300933 MRPS30Q9NP92 439 aaKnown RBP20.78■□□□□ 0.92
TPM4-201ENST00000300933 PDPK1O15530 556 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 ERAL1O75616 437 aaKnown RBP20.77■□□□□ 0.92
TPM4-201ENST00000300933 C9P02748 559 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 PEBP1P30086 187 aaKnown RBP20.77■□□□□ 0.92
TPM4-201ENST00000300933 TGFBR2P37173 567 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 TNFRSF4P43489 277 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 PRKAG1P54619 331 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 RPP38P78345 283 aaKnown RBP20.77■□□□□ 0.92
TPM4-201ENST00000300933 MFSD4BQ5TF39 518 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 CCBE1Q6UXH8 406 aaPredicted RBP20.77■□□□□ 0.92
TPM4-201ENST00000300933 SLC5A8Q8N695 610 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 SETD9Q8NE22 299 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 OR9Q2Q8NGE9 314 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 OR5D16Q8NGK9 328 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 CREB3L4Q8TEY5 395 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 FBLIM1Q8WUP2 373 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 ANKRA2Q9H9E1 313 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 AMBNQ9NP70 447 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 WDR70Q9NW82 654 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 LYVE1Q9Y5Y7 322 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 ISPDA4D126 451 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 LRIT2A6NDA9 550 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 AGAP5A6NIR3 686 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 FAM227AF5H4B4 570 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 M0R129 80 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms