RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TBC1D3BA6NDS4 549 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 TAF4O00268 1085 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 HMGN4O00479 90 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 CAPN5O15484 640 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-204ENST00000300862 VEGFDO43915 354 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 PTTG1O95997 202 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 FGBP02675 491 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 EPHX1P07099 455 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 OR12D1P0DN82 309 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 MYOGP15173 224 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 CD72P21854 359 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 IL12RB1P42701 662 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 PIN1Q13526 163 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-204ENST00000300862 ZNF765Q7L2R6 523 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 MEX3DQ86XN8 651 aaKnown RBP12.23□□□□□ -0.45
HIF3A-204ENST00000300862 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-204ENST00000300862 IQCF1Q8N6M8 205 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 AMER2Q8N7J2 671 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 XAGE5Q8WWM1 108 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 OR5P2Q8WZ92 322 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 MAPKAP1Q9BPZ7 522 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 KCNS3Q9BQ31 491 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 OSGEPL1Q9H4B0 414 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 C11orf49Q9H6J7 331 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 MOV10Q9HCE1 1003 aaKnown RBP12.23□□□□□ -0.45
HIF3A-204ENST00000300862 CLN6Q9NWW5 311 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 USP34Q70CQ2 3546 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 SAGE2PA6NJ88 616 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 M0R3H8 397 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 SLC28A2O43868 658 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 KIAA0513O60268 411 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 RB1P06400 928 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 SOX3P41225 446 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 PRKAG1P54619 331 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 COPZ1P61923 177 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 HEPACAMQ14CZ8 416 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 FAM78AQ5JUQ0 283 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 SPATC1Q76KD6 591 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 UBE3DQ7Z6J8 389 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 CELF2-AS1Q8N7Q2 184 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 LINC01555Q8NAE3 123 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 SMPDL3AQ92484 453 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 C17orf62Q9BQA9 187 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 MVB12BQ9H7P6 319 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 SEMA3GQ9NS98 782 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 TRPC4Q9UBN4 977 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 REV1Q9UBZ9 1251 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 KCND3Q9UK17 655 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 TMCC3Q9ULS5 477 aa12.23□□□□□ -0.45
HIF3A-204ENST00000300862 PRR23AA6NEV1 266 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 TLR4O00206 839 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 KIAA0355O15063 1070 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 SSX4O60224 188 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 PCDH8O95206 1070 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 HOXB3P14651 431 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 TNNI3P19429 210 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 ELAVL4P26378 380 aaKnown RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 CCT3P49368 545 aaKnown RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 CCR8P51685 355 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 CDK3Q00526 305 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 SSX1Q16384 188 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 WSCD2Q2TBF2 565 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 ZNF750Q32MQ0 723 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 PLAG1Q6DJT9 500 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 PNCKQ6P2M8 343 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 TUBA3EQ6PEY2 450 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 PARP16Q8N5Y8 322 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 OR5K2Q8NHB8 316 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 LILRB4Q8NHJ6 448 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 SMG7Q92540 1137 aaKnown RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 PPP1R16AQ96I34 528 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 TREX2Q9BQ50 279 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 UCK2Q9BZX2 261 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 EXOSC4Q9NPD3 245 aaKnown RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 SEC14L3Q9UDX4 400 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 A0A1W2PPV9 198 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 NME6O75414 186 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 ALOX12P18054 663 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 PCBP4P57723 403 aaKnown RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 TARDBPQ13148 414 aaKnown RBP eCLIP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 TCEA2Q15560 299 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 FBXO43Q4G163 708 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 DCST1Q5T197 706 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 CCBE1Q6UXH8 406 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 LRRTM4Q86VH4 590 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 FAM46DQ8NEK8 389 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 KBTBD8Q8NFY9 601 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 SLC7A13Q8TCU3 470 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 CHAC2Q8WUX2 184 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 TEFMQ96QE5 360 aaKnown RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 MENTQ9BUN1 341 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 RHBGQ9H310 441 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 TMEM245Q9H330 911 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 A4GALTQ9NPC4 353 aa12.22□□□□□ -0.45
HIF3A-204ENST00000300862 MBNL1Q9NR56 388 aaKnown RBP12.22□□□□□ -0.45
HIF3A-204ENST00000300862 EFCAB10A6NFE3 127 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 A8MVJ9 347 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 WWP2O00308 870 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 CTDSP2O14595 271 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms