RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 MTSS1LQ765P7 747 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 CCDC116Q8IYX3 515 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 WDR37Q9Y2I8 494 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 ADH1BP00325 375 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 ALOX12P18054 663 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 C5AR1P21730 350 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 OPRD1P41143 372 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 RGS6P49758 472 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 SEPHS1P49903 392 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 LIM2P55344 173 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 RPS3AP61247 264 aaKnown RBP12.9□□□□□ -0.34
CDH8-201ENST00000299345 TGM3Q08188 693 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 SPANXN2Q5MJ10 180 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 ZNF367Q7RTV3 350 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 RBM45Q8IUH3 476 aaKnown RBP12.9□□□□□ -0.34
CDH8-201ENST00000299345 TCEANCQ8N8B7 351 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 KIAA1958Q8N8K9 716 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 KLHL6Q8WZ60 621 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 CHFRQ96EP1 664 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 TRMT61BQ9BVS5 477 aaKnown RBP12.9□□□□□ -0.34
CDH8-201ENST00000299345 FBXO8Q9NRD0 319 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 LAMA2P24043 3122 aaKnown RBP12.9□□□□□ -0.35
CDH8-201ENST00000299345 NOTCH4Q99466 2003 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 M0R3H8 397 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 HMGN4O00479 90 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 RGS5O15539 181 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 TBX1O43435 398 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 OXSR1O95747 527 aaPredicted RBP12.89□□□□□ -0.35
CDH8-201ENST00000299345 TGFBR2P37173 567 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 TMEM35AQ53FP2 167 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 MLIPQ5VWP3 458 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 TCTN3Q6NUS6 607 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 POC5Q8NA72 575 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 SRFBP1Q8NEF9 429 aaKnown RBP12.89□□□□□ -0.35
CDH8-201ENST00000299345 HERVK_113Q902F9 699 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 ALOXE3Q9BYJ1 711 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 TRIM45Q9H8W5 580 aaPredicted RBP12.89□□□□□ -0.35
CDH8-201ENST00000299345 ZSCAN32Q9NX65 697 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 ADAM29Q9UKF5 820 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 IFT52Q9Y366 437 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 A0A1W2PQU0 124 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 M0R082 166 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 MYL12BO14950 172 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 DLGAP3O95886 979 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 DNTTP04053 509 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 DRD3P35462 400 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 PPP5CP53041 499 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 C2orf27AQ580R0 203 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 TPRG1LQ5T0D9 272 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 ATAD3BQ5T9A4 648 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 KXD1Q9BQD3 176 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 SLIRPQ9GZT3 109 aaKnown RBP12.89□□□□□ -0.35
CDH8-201ENST00000299345 NT5DC2Q9H857 520 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 TRPM6Q9BX84 2022 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 WASHC1A8K0Z3 465 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 GPR89AB7ZAQ6 455 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 ENTPD6O75354 484 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 GPR89BP0CG08 455 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 CSNK2A2P19784 350 aaPredicted RBP12.89□□□□□ -0.35
CDH8-201ENST00000299345 CMPK1P30085 196 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 KCNJ5P48544 419 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 TEKQ02763 1124 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 TOR1AIP1Q5JTV8 583 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 ZNF776Q68DI1 518 aaPredicted RBP12.89□□□□□ -0.35
CDH8-201ENST00000299345 PLAG1Q6DJT9 500 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 WASH2PQ6VEQ5 465 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 AMER3Q8N944 861 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 LINC01555Q8NAE3 123 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 MINDY2Q8NBR6 621 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 COL26A1Q96A83 441 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 GLIPR2Q9H4G4 154 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 RERGLQ9H628 205 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 POLE4Q9NR33 117 aa12.89□□□□□ -0.35
CDH8-201ENST00000299345 RPL36Q9Y3U8 105 aaKnown RBP12.89□□□□□ -0.35
CDH8-201ENST00000299345 ZAR1LA6NP61 321 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 PRKRAO75569 313 aaKnown RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 FUT4P22083 530 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 ACVR2AP27037 513 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 RPS21P63220 83 aaKnown RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 PRR5P85299 388 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 ALDH6A1Q02252 535 aaKnown RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 GAB4Q2WGN9 574 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 AGBL4Q5VU57 503 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 SLC22A16Q86VW1 577 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 GPR32P1Q8NGA4 272 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 ARMC5Q96C12 935 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 MROQ9BYG7 248 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 DDX31Q9H8H2 851 aaKnown RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 C3orf14Q9HBI5 128 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 CNOT2Q9NZN8 540 aaKnown RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 PNMA8CA0A1B0GUJ8 204 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 SAGE2PA6NJ88 616 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 CCRL2O00421 344 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 ELAVL4P26378 380 aaKnown RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 TAS2R38P59533 333 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 TRA2BP62995 288 aaKnown RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 SOWAHCQ53LP3 525 aaPredicted RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 TJAP1Q5JTD0 557 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 OLIG3Q7RTU3 272 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 OR52E1Q8NGJ3 308 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms