RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 VAC14Q08AM6 782 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 C1orf189Q5VU69 101 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 ZNF385CQ66K41 422 aaPredicted RBP23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 OR5AK3PQ8NH89 298 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 COL26A1Q96A83 441 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 ELP4Q96EB1 424 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 NEURL3Q96EH8 262 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 CMKLR1Q99788 373 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 RBCK1Q9BYM8 510 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 PIF1Q9H611 641 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 PRTFDC1Q9NRG1 225 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 ACSL6Q9UKU0 697 aa23.12■■□□□ 1.29
GTF2A1-201ENST00000298173 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 TGFBR3LH3BV60 316 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 ENTPD5O75356 428 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 KCNK5O95279 499 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 KRT75O95678 551 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 NTRK1P04629 796 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 BTG2P78543 158 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 SLCO6A1Q86UG4 719 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 OR2T12Q8NG77 320 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 OR52N2Q8NGI0 321 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 OR9A2Q8NGT5 310 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 PNPT1Q8TCS8 783 aaKnown RBP23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 FAM120BQ96EK7 910 aaKnown RBP23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 PHOX2BQ99453 314 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 CTRCQ99895 268 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 SEMA3GQ9NS98 782 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 NTMQ9P121 344 aa23.11■■□□□ 1.29
GTF2A1-201ENST00000298173 RNF103-CHMP3A0A140T963 221 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 JRKO75564 520 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 BMP10O95393 424 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 SLC35E2P0CK97 266 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 CDK4P11802 303 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 FBLP22087 321 aaKnown RBP23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 PTGER1P34995 402 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 GPC1P35052 558 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 CCNIQ14094 377 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 COX15Q7KZN9 410 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 ASCL5Q7RTU5 278 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 SLC7A5P2Q9GIP4 190 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 TRPC4Q9UBN4 977 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 EGFL7Q9UHF1 273 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 NUP210LQ5VU65 1888 aa23.1■■□□□ 1.29
GTF2A1-201ENST00000298173 FAM220BPB1ANY3 271 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 PLOD2O00469 737 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 MT-CO3P00414 261 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 RORAP35398 523 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 SOAT1P35610 550 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 CHI3L1P36222 383 aaPredicted RBP23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 RIPK1Q13546 671 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 FLOT2Q14254 428 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 LTB4RQ15722 352 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 ADRM1Q16186 407 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 COX20Q5RI15 118 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 C6orf120Q7Z4R8 191 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 DEFB124Q8NES8 71 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 SFXN5Q8TD22 340 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 REXO5Q96IC2 774 aaKnown RBP23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 TMEM121BQ9BXQ6 578 aaPredicted RBP23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 STRADBQ9C0K7 418 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 MUC13Q9H3R2 512 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 ACTR3BQ9P1U1 418 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 RIF1Q5UIP0 2472 aaKnown RBP23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 IGLV3-12A0A075B6K2 115 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 CDC123O75794 336 aaPredicted RBP23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 FADDQ13158 208 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 SLC13A2Q13183 592 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 ZNF628Q5EBL2 1059 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 ARHGAP40Q5TG30 622 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 RNF130Q86XS8 419 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 ADCY4Q8NFM4 1077 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 MOAP1Q96BY2 351 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 CLIP3Q96DZ5 547 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 LIN37Q96GY3 246 aaPredicted RBP23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 TGIF2Q9GZN2 237 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 MKKSQ9NPJ1 570 aaPredicted RBP23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 AKAP7Q9P0M2 348 aaPredicted RBP23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 ZNF292O60281 2723 aa23.09■■□□□ 1.29
GTF2A1-201ENST00000298173 ELOVL7A1L3X0 281 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 OR2W5A6NFC9 320 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 TNFRSF21O75509 655 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 IFI6P09912 130 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 BMP2P12643 396 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 CLDN6P56747 220 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 MGAT2Q10469 447 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 DHRS13Q6UX07 377 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 TMEM107Q6UX40 140 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 PTOV1Q86YD1 416 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 ZC3H7AQ8IWR0 971 aaKnown RBP23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 ZNF675Q8TD23 568 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 SPATA9Q9BWV2 254 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 ALOXE3Q9BYJ1 711 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 RAD21L1Q9H4I0 556 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 LOXL2Q9Y4K0 774 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 MMACHCQ9Y4U1 282 aa23.08■■□□□ 1.29
GTF2A1-201ENST00000298173 MYOCOSA0A1B0GUC4 107 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 TM4SF5O14894 197 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 EMC8O43402 210 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms