RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TXLNGYQ9BZA5 131 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SUV39H2Q9H5I1 410 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 MAGIXQ9H6Y5 334 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 NLGN3Q9NZ94 848 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 HCN3Q9P1Z3 774 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ANK1P16157 1881 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ANKRD66B4E2M5 251 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 DISC1C4P0D8 188 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 EEDO75530 441 aaKnown RBP11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 APBB3O95704 486 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 KLK1P06870 262 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 F7P08709 466 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 CELP19835 753 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 AHCYP23526 432 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 FCARP24071 287 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 STARD6P59095 220 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 DNM1P34Q6PK57 102 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC15A4Q8N697 577 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 PROKR2Q8NFJ6 384 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR2AJ1Q8NGZ0 328 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 TM9SF2Q99805 663 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 CD244Q9BZW8 370 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 MRPS30Q9NP92 439 aaKnown RBP11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 MYH10P35580 1976 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 GFRA2O00451 464 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 KIAA0513O60268 411 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 RPS24P62847 133 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 GINS1Q14691 196 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 SPHARQ15513 63 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 CHRNA6Q15825 494 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 PNCKQ6P2M8 343 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 THOC6Q86W42 341 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 CARM1Q86X55 608 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 KIF18BQ86Y91 864 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR13J1Q8NGT2 312 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR2L8Q8NGY9 312 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 FIBINQ8TAL6 211 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC22A18Q96BI1 424 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 HSPA12BQ96MM6 686 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 PEBP4Q96S96 227 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 TTYH2Q9BSA4 534 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 SPATA9Q9BWV2 254 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 ABCG5Q9H222 651 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 TMEM184CQ9NVA4 438 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 HS3ST4Q9Y661 456 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 ATP5A1P25705 553 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 NPRL3Q12980 569 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 TOR1AIP1Q5JTV8 583 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 LRRN1Q6UXK5 716 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 DPY19L3Q6ZPD9 716 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 YIPF7Q8N8F6 280 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 TSGA13Q96PP4 275 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 TSNAXQ99598 290 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 FOXQ1Q9C009 403 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 GMEB2Q9UKD1 530 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 CH25HO95992 272 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 LEPRP48357 1165 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 PSMD8P48556 350 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZMYND11Q15326 602 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 MINDY4Q4G0A6 757 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC25A25Q6KCM7 469 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 CYP4V2Q6ZWL3 525 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 RPS27LQ71UM5 84 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC39A13Q96H72 371 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR51I1Q9H343 314 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
SYNGAP1-201ENST00000293748 FAAHO00519 579 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 IL12BP29460 328 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 UGT2B10P36537 528 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 S100A12P80511 92 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 FADDQ13158 208 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 BORAQ6PGQ7 559 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 MFSD2AQ8NA29 543 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 SMPDL3AQ92484 453 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 GAL3ST3Q96A11 431 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 MAELQ96JY0 434 aaKnown RBP11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 DOHHQ9BU89 302 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR2AG1Q9H205 316 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 COPZ2Q9P299 210 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 SH2B3Q9UQQ2 575 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 RNF11Q9Y3C5 154 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 J3KR12 359 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 FOXD2O60548 495 aaPredicted RBP11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 MRPS14O60783 128 aaKnown RBP11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 PCCBP05166 539 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC6A6P31641 620 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 GDF5P43026 501 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 MAN2A2P49641 1150 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF763Q0D2J5 394 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 GPR68Q15743 365 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 CARD16Q5EG05 197 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 STEAP4Q687X5 459 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC27A4Q6P1M0 643 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 TMEM135Q86UB9 458 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 TICAM1Q8IUC6 712 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 DTWD2Q8NBA8 298 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 CCDC54Q8NEL0 328 aa11.31□□□□□ -0.6
SYNGAP1-201ENST00000293748 COQ8AQ8NI60 647 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms