RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 RFT1Q96AA3 541 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 MGLLQ99685 303 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 MTHFD2LQ9H903 347 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-201ENST00000292478 SMURF1Q9HCE7 757 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 TMEM181Q9P2C4 612 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 SARDHQ9UL12 918 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 STUB1Q9UNE7 303 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 C2orf92A0A1B0GVN3 265 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 GPR89AB7ZAQ6 455 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 DUX1O43812 170 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 JRKO75564 520 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 KDM4BO94953 1096 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 GPR89BP0CG08 455 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 FBLP22087 321 aaKnown RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 HYAL2Q12891 473 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 TMEM107Q6UX40 140 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 HTR3DQ70Z44 454 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 DPPA4Q7L190 304 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 PRSS48Q7RTY5 328 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 TSPAN33Q86UF1 283 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 ARHGAP12Q8IWW6 846 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 DENND6BQ8NEG7 585 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 TRUB1Q8WWH5 349 aaKnown RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 FCAMRQ8WWV6 532 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 PTERQ96BW5 349 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 IL17FQ96PD4 163 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 WACQ9BTA9 647 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 LIN28AQ9H9Z2 209 aaKnown RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 IL26Q9NPH9 171 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 PLCL2Q9UPR0 1127 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 ENPP4Q9Y6X5 453 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 A0A1B0GVT2 93 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 VSTM5A8MXK1 200 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 SLC1A7O00341 560 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 HCKP08631 526 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 CLUP10909 449 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 CST5P28325 142 aaPredicted RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 DPP6P42658 865 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF140P52738 457 aaPredicted RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 SPHARQ15513 63 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 OCLNQ16625 522 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 TAZQ16635 292 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 DEFB134Q4QY38 66 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 SNX29P2Q8IUI4 249 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF615Q8N8J6 731 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 LGALS12Q96DT0 336 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 HSPBAP1Q96EW2 488 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 SORT1Q99523 831 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 NTMT1Q9BV86 223 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 BOCQ9BWV1 1114 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 ANKRD60Q9BZ19 345 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 MAGED1Q9Y5V3 778 aaPredicted RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 ST14Q9Y5Y6 855 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 MYH3P11055 1940 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 ANHXE9PGG2 379 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 RNASET2O00584 256 aaKnown RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 HK3P52790 923 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 GTF2IRD2BQ6EKJ0 949 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 ENPP6Q6UWR7 440 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 COMMD6Q7Z4G1 85 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 GTF2IRD2Q86UP8 949 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 TMEM25Q86YD3 366 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 Q8N9G6 341 aaPredicted RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 OR6N2Q8NGY6 317 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 PRR11Q96HE9 360 aaPredicted RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 TTYH2Q9BSA4 534 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 SLC17A9Q9BYT1 436 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 GMEB2Q9UKD1 530 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 CYP8B1Q9UNU6 501 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 GPR34Q9UPC5 381 aa12.21□□□□□ -0.45
PTCD1-201ENST00000292478 ZFR2Q9UPR6 939 aaKnown RBP12.21□□□□□ -0.45
PTCD1-201ENST00000292478 GXYLT2A0PJZ3 443 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 TIMP1P01033 207 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 ITGA5P08648 1049 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 CELP19835 753 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 MAP2K4P45985 399 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 CLRN1P58418 232 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 MARCH8Q5T0T0 291 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 LRRC20Q8TCA0 184 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 SECISBP2Q96T21 854 aaKnown RBP12.21□□□□□ -0.46
PTCD1-201ENST00000292478 METTL8Q9H825 291 aaKnown RBP12.21□□□□□ -0.46
PTCD1-201ENST00000292478 SUSD2Q9UGT4 822 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 PLEKHA6Q9Y2H5 1048 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 ALS2Q96Q42 1657 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 RABIFP47224 123 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 GCGRP47871 477 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 GNG2P59768 71 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 CHAF1BQ13112 559 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 RGNQ15493 299 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 CPZQ66K79 652 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 SYCE2Q6PIF2 218 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 TMEM125Q96AQ2 219 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 ACTRT3Q9BYD9 372 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 SLC6A15Q9H2J7 730 aa12.21□□□□□ -0.46
PTCD1-201ENST00000292478 CAPN3P20807 821 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 HOXC13P31276 330 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 GLP1RP43220 463 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ENTPD1P49961 510 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 HTR6P50406 440 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms