RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 KBTBD8Q8NFY9 601 aa18.89■□□□□ 0.61
SCUBE1-201ENST00000290460 SLC7A13Q8TCU3 470 aa18.89■□□□□ 0.61
SCUBE1-201ENST00000290460 ZNF354BQ96LW1 612 aa18.89■□□□□ 0.61
SCUBE1-201ENST00000290460 INSM2Q96T92 566 aaPredicted RBP18.89■□□□□ 0.61
SCUBE1-201ENST00000290460 GLIPR2Q9H4G4 154 aa18.89■□□□□ 0.61
SCUBE1-201ENST00000290460 KLHL31Q9H511 634 aa18.89■□□□□ 0.61
SCUBE1-201ENST00000290460 MVB12BQ9H7P6 319 aa18.89■□□□□ 0.61
SCUBE1-201ENST00000290460 IMP3Q9NV31 184 aaKnown RBP18.89■□□□□ 0.61
SCUBE1-201ENST00000290460 TRPC4Q9UBN4 977 aa18.89■□□□□ 0.61
SCUBE1-201ENST00000290460 SCN3AQ9NY46 2000 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 ARHGAP33O14559 1287 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 ATP6V1G1O75348 118 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 SSR2P43308 183 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 OLR1P78380 273 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 LSM11P83369 360 aaKnown RBP eCLIP18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 UBE3AQ05086 875 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 AGBL4Q5VU57 503 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 FAM46CQ5VWP2 391 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 RBM12BQ8IXT5 1001 aaKnown RBP18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 CYP4Z2PQ8N1L4 340 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 MINDY2Q8NBR6 621 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 QRFPRQ96P65 431 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 YIPF4Q9BSR8 244 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 CNOT2Q9NZN8 540 aaKnown RBP18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 SCHIP1Q9P0W5 487 aaPredicted RBP18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 CLEC2DQ9UHP7 191 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 ZNF229Q9UJW7 825 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 KCNK6Q9Y257 313 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 PRR23AA6NEV1 266 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 C4orf51C9J302 202 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 SCAMP1O15126 338 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 KIAA0513O60268 411 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 MPZL2O60487 215 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 PDE9AO76083 593 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 CKMT1AP12532 417 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 GPC1P35052 558 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 SLC15A1P46059 708 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 PRKAG1P54619 331 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 TARDBPQ13148 414 aaKnown RBP eCLIP18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 SSX1Q16384 188 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 STEAP3Q658P3 488 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 OR4C11Q6IEV9 310 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 PGBD2Q6P3X8 592 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 GET4Q7L5D6 327 aaPredicted RBP18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 ATCAYQ86WG3 371 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 IQCF1Q8N6M8 205 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 HTRA1Q92743 480 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 RAB7BQ96AH8 199 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 NXF2Q9GZY0 626 aaKnown RBP18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 PCBD2Q9H0N5 130 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 MIR1-1HGQ9H1L0 117 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 PLEKHM1Q9Y4G2 1056 aa18.88■□□□□ 0.61
SCUBE1-201ENST00000290460 KMOO15229 486 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 PAK4O96013 591 aaPredicted RBP18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 ALOX5P09917 674 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 GTF2E2P29084 291 aaKnown RBP18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 HSD17B2P37059 387 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 XKP51811 444 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 UGT2B15P54855 530 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 GPR19Q15760 415 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 ZNF750Q32MQ0 723 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 C9orf43Q8TAL5 461 aaPredicted RBP18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 CREB3L4Q8TEY5 395 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 SLC35G5Q96KT7 338 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 AMDHD1Q96NU7 426 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 ZNF607Q96SK3 696 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 POLR2J3Q9H1A7 115 aaKnown RBP18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 DDX31Q9H8H2 851 aaKnown RBP18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 SLC25A19Q9HC21 320 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 CTPS2Q9NRF8 586 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 INIPQ9NRY2 104 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 SACM1LQ9NTJ5 587 aa18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 ZCCHC3Q9NUD5 404 aaKnown RBP18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 WBP11Q9Y2W2 641 aaKnown RBP18.87■□□□□ 0.61
SCUBE1-201ENST00000290460 A0A0A6YYD5 115 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 NR2F1P10589 423 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 TNNI3P19429 210 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 MAGP20916 626 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 SOX3P41225 446 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 ILKQ13418 452 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 MYO9BQ13459 2157 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 IRF4Q15306 451 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 PARP16Q8N5Y8 322 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 OR2A1Q8NGT9 310 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 WDR26Q9H7D7 661 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 CCDC59Q9P031 241 aaKnown RBP18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 THAP10Q9P2Z0 257 aaPredicted RBP18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 P2RX2Q9UBL9 471 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 A4GNTQ9UNA3 340 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 MGAT4BQ9UQ53 548 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 CAB39Q9Y376 341 aaPredicted RBP18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 KLK4Q9Y5K2 254 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 LRIT2A6NDA9 550 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 OR52A4PA6NMU1 304 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 FAAHO00519 579 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 NCBP2P52298 156 aaKnown RBP eCLIP18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 FGL2Q14314 439 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 PDGFRLQ15198 375 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 AGAP7PQ5VUJ5 663 aa18.86■□□□□ 0.61
SCUBE1-201ENST00000290460 NATD1Q8N6N6 113 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms