RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 UQCRFS1P47985 274 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 SERPINB4P48594 390 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 SPRED3Q2MJR0 410 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 ZNF750Q32MQ0 723 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 TNFAIP8L3Q5GJ75 292 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 BCORP1Q8N888 145 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 TMEM178AQ8NBL3 297 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 AGR3Q8TD06 166 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 C16orf78Q8WTQ4 265 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 FAR1Q8WVX9 515 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 TMEM125Q96AQ2 219 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 STMN4Q9H169 189 aaPredicted RBP23.35■■□□□ 1.33
PDF-201ENST00000288022 CES1P1Q9UKY3 287 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 PTGDR2Q9Y5Y4 395 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 ACTL7BQ9Y614 415 aa23.35■■□□□ 1.33
PDF-201ENST00000288022 TMEM200CA6NKL6 621 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 TM9SF1O15321 606 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 RGS14O43566 566 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 SLC25A12O75746 678 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 NEURL1O76050 574 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 IGKV3-11P04433 115 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 SP1P08047 785 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 NT5EP21589 574 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 GALNSP34059 522 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 SERPINB5P36952 375 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 FEN1P39748 380 aaKnown RBP23.34■■□□□ 1.33
PDF-201ENST00000288022 HK2P52789 917 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 MAPKAPK3Q16644 382 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 SH2D4BQ5SQS7 431 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 KANK2Q63ZY3 851 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 SLC25A25Q6KCM7 469 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 GALNT18Q6P9A2 607 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 RNF111Q6ZNA4 994 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 GALNT12Q8IXK2 581 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 ASB15Q8WXK1 588 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 TAAR6Q96RI8 345 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 PFDN4Q9NQP4 134 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 OLAHQ9NV23 265 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 SIRT5Q9NXA8 310 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 HEY2Q9UBP5 337 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 UTS2RQ9UKP6 389 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 TRAF6Q9Y4K3 522 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 POLR3HQ9Y535 204 aaPredicted RBP23.34■■□□□ 1.33
PDF-201ENST00000288022 ZNF780BQ9Y6R6 833 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 CNTRLQ7Z7A1 2325 aa23.34■■□□□ 1.33
PDF-201ENST00000288022 TMEM233B4DJY2 109 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 SEC22BO75396 215 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 DRD2P14416 443 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 CSNK2A2P19784 350 aaPredicted RBP23.33■■□□□ 1.33
PDF-201ENST00000288022 MRPL49Q13405 166 aaKnown RBP23.33■■□□□ 1.33
PDF-201ENST00000288022 HEPACAMQ14CZ8 416 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 SLC29A4Q7RTT9 530 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 C9orf40Q8IXQ3 194 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 DDIASQ8IXT1 998 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 CLYBLQ8N0X4 340 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 CYP4Z2PQ8N1L4 340 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 C11orf24Q96F05 449 aaPredicted RBP23.33■■□□□ 1.33
PDF-201ENST00000288022 SCMH1Q96GD3 660 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 BARD1Q99728 777 aaKnown RBP23.33■■□□□ 1.33
PDF-201ENST00000288022 CXorf21Q9HAI6 301 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 ERVK-11Q9UQG0 969 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 PCDHGB6Q9Y5F9 930 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 DNAJC15Q9Y5T4 150 aa23.33■■□□□ 1.33
PDF-201ENST00000288022 SHANK1Q9Y566 2161 aa23.33■■□□□ 1.32
PDF-201ENST00000288022 A8MVJ9 347 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 ZWINTO95229 277 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 CRYABP02511 175 aaKnown RBP23.32■■□□□ 1.32
PDF-201ENST00000288022 LINC00032P0C843 101 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 GSTM5P46439 218 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 PMP22Q01453 160 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 ZNF763Q0D2J5 394 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 ELOAQ14241 798 aaKnown RBP23.32■■□□□ 1.32
PDF-201ENST00000288022 FAM180BQ6P0A1 224 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 GALNTL5Q7Z4T8 443 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 HOMEZQ8IX15 550 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 TWIST2Q8WVJ9 160 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 GAL3ST4Q96RP7 486 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 RASL10BQ96S79 203 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 TRIM45Q9H8W5 580 aaPredicted RBP23.32■■□□□ 1.32
PDF-201ENST00000288022 LRTM1Q9HBL6 345 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 HPF1Q9NWY4 346 aa23.32■■□□□ 1.32
PDF-201ENST00000288022 HELZ2Q9BYK8 2649 aaKnown RBP23.32■■□□□ 1.32
PDF-201ENST00000288022 ZIC2O95409 532 aaPredicted RBP23.31■■□□□ 1.32
PDF-201ENST00000288022 FGF4P08620 206 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 NEFHP12036 1026 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 SSTR4P31391 388 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 SOX3P41225 446 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 CHI3L2Q15782 390 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 IL20RBQ6UXL0 311 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 FAM98AQ8NCA5 519 aaKnown RBP23.31■■□□□ 1.32
PDF-201ENST00000288022 FAM76AQ8TAV0 307 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 NUBPLQ8TB37 319 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 EXOSC8Q96B26 276 aaKnown RBP23.31■■□□□ 1.32
PDF-201ENST00000288022 BRINP2Q9C0B6 783 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 TUBB1Q9H4B7 451 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 C1orf109Q9NX04 203 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 CCL27Q9Y4X3 112 aa23.31■■□□□ 1.32
PDF-201ENST00000288022 ANKUB1A6NFN9 424 aa23.3■■□□□ 1.32
PDF-201ENST00000288022 BIRC5O15392 142 aa23.3■■□□□ 1.32
PDF-201ENST00000288022 NME2P1O60361 137 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms