RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 CT62P0C5K7 136 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 BCKDHAP12694 445 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 PORP16435 677 aaPredicted RBP18.5■□□□□ 0.55
TIMP4-201ENST00000287814 SOX18P35713 384 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 CLCN2P51788 898 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 ACER2Q5QJU3 275 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 C7orf57Q8NEG2 295 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 OR1N1Q8NGS0 311 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 THAP3Q8WTV1 239 aaPredicted RBP18.5■□□□□ 0.55
TIMP4-201ENST00000287814 RIT1Q92963 219 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 TUBGCP3Q96CW5 907 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 NUF2Q9BZD4 464 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 ACBD3Q9H3P7 528 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 CDCP1Q9H5V8 836 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 CXorf21Q9HAI6 301 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 MARCOQ9UEW3 520 aaPredicted RBP18.5■□□□□ 0.55
TIMP4-201ENST00000287814 TMED5Q9Y3A6 229 aa18.5■□□□□ 0.55
TIMP4-201ENST00000287814 COL6A6A6NMZ7 2263 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 TMEM200CA6NKL6 621 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 WDPCPO95876 746 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 IGKV3-11P04433 115 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 COX7A2P14406 83 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 DDCP20711 480 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 GSTM5P46439 218 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 ZNF267Q14586 743 aaPredicted RBP18.49■□□□□ 0.55
TIMP4-201ENST00000287814 ATP6AP1LQ52LC2 224 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 C16orf47Q6ZP98 133 aaPredicted RBP18.49■□□□□ 0.55
TIMP4-201ENST00000287814 TICAM1Q8IUC6 712 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 TEX19Q8NA77 164 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 CATSPER1Q8NEC5 780 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 CLHC1Q8NHS4 586 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 GFM2Q969S9 779 aaKnown RBP18.49■□□□□ 0.55
TIMP4-201ENST00000287814 EXOSC8Q96B26 276 aaKnown RBP18.49■□□□□ 0.55
TIMP4-201ENST00000287814 TSSK3Q96PN8 268 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 PELOQ9BRX2 385 aaKnown RBP18.49■□□□□ 0.55
TIMP4-201ENST00000287814 C1orf50Q9BV19 199 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 DEFB126Q9BYW3 111 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 AKTIPQ9H8T0 292 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 LIN28AQ9H9Z2 209 aaKnown RBP18.49■□□□□ 0.55
TIMP4-201ENST00000287814 PSME2Q9UL46 239 aa18.49■□□□□ 0.55
TIMP4-201ENST00000287814 CNTRLQ7Z7A1 2325 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 DPM1O60762 260 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 KITP10721 976 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 GALNSP34059 522 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 ERVK-8P63133 956 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 KLRB1Q12918 225 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 SPRED3Q2MJR0 410 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 ABHD17BQ5VST6 288 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 RPS19BP1Q86WX3 136 aaKnown RBP18.48■□□□□ 0.55
TIMP4-201ENST00000287814 BEST3Q8N1M1 668 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 ZADH2Q8N4Q0 377 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 SLC5A8Q8N695 610 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 FBXL20Q96IG2 436 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 ZNF354BQ96LW1 612 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 CNPPD1Q9BV87 410 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 EPS8L2Q9H6S3 715 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 INTS9Q9NV88 658 aaKnown RBP18.48■□□□□ 0.55
TIMP4-201ENST00000287814 EHD3Q9NZN3 535 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 LUZP4Q9P127 313 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 ERVK-19Q9WJR5 959 aa18.48■□□□□ 0.55
TIMP4-201ENST00000287814 WBP11Q9Y2W2 641 aaKnown RBP18.48■□□□□ 0.55
TIMP4-201ENST00000287814 CLPSP04118 112 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 CSNK2A2P19784 350 aaPredicted RBP18.47■□□□□ 0.55
TIMP4-201ENST00000287814 MGAT2Q10469 447 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 LTB4RQ15722 352 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 MEP1AQ16819 746 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 PLEKHN1Q494U1 663 aaPredicted RBP18.47■□□□□ 0.55
TIMP4-201ENST00000287814 SLC6A19Q695T7 634 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 IKBIPQ70UQ0 350 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 HPS6Q86YV9 775 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 CCDC116Q8IYX3 515 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 ARMC10Q8N2F6 343 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 FNDC5Q8NAU1 212 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 ADCY4Q8NFM4 1077 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 HAS2Q92819 552 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 SLCO1B3Q9NPD5 702 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 SLC35C2Q9NQQ7 365 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 TEKT2Q9UIF3 430 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 ZNF780BQ9Y6R6 833 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 B8ZZF3 427 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 AKAP10O43572 662 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 LRATO95237 230 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 ATP1B1P05026 303 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 S1PR1P21453 382 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 NT5EP21589 574 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 MLF1P58340 268 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 PRICKLE4Q2TBC4 344 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 ZNF468Q5VIY5 522 aaPredicted RBP18.47■□□□□ 0.55
TIMP4-201ENST00000287814 IL23RQ5VWK5 629 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 ANKRD26P1Q6NSI1 321 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 FAM111BQ6SJ93 734 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 HSDL2Q6YN16 418 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 Q6ZS92 163 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 WDR75Q8IWA0 830 aaKnown RBP18.47■□□□□ 0.55
TIMP4-201ENST00000287814 LIX1Q8N485 282 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 Q8NA96 180 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 SUN3Q8TAQ9 357 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 NUDT8Q8WV74 236 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 TM9SF4Q92544 642 aa18.47■□□□□ 0.55
TIMP4-201ENST00000287814 MEAF6Q9HAF1 191 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms