RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 NTN4Q9HB63 628 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MRPS30Q9NP92 439 aaKnown RBP13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CD320Q9NPF0 282 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TAS2R9Q9NYW1 312 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CNOT11Q9UKZ1 510 aaKnown RBP13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 FRMPD3Q5JV73 1810 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 YY2O15391 372 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 FCGR1AP12314 374 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CD36P16671 472 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ZNF30P17039 623 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TOP3AQ13472 1001 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 BTBD16Q32M84 506 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 IGSF11Q5DX21 431 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PRMT9Q6P2P2 845 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 BCDIN3DQ7Z5W3 292 aaKnown RBP13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ZNF547Q8IVP9 402 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 FAM217AQ8IXS0 508 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ECHDC3Q96DC8 303 aa13.45□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CIB4A0PJX0 185 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 BBIP1A8MTZ0 92 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 B4GALT2O60909 372 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 LDB3O75112 727 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 NTN1O95631 604 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 OR12D1P0DN82 309 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 UGT8Q16880 541 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CCNJQ5T5M9 372 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 NRARPQ7Z6K4 114 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RAB42Q8N4Z0 105 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PHF10Q8WUB8 498 aaKnown RBP13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PSD2Q9BQI7 771 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CHCHD6Q9BRQ6 235 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 KLHL31Q9H511 634 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AKIP1Q9NQ31 210 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RAD18Q9NS91 495 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ARMC1Q9NVT9 282 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 IFNA16P05015 189 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 GAB1Q13480 694 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CDK10Q15131 360 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 GPR68Q15743 365 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 NPTX1Q15818 432 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ZNF385BQ569K4 471 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 HENMT1Q5T8I9 393 aaKnown RBP13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TTC23Q5W5X9 447 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 GDPD3Q7L5L3 318 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 KRT78Q8N1N4 520 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RIT1Q92963 219 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TXNDC15Q96J42 360 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MCCC2Q9HCC0 563 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PAK1IP1Q9NWT1 392 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ZIM2Q9NZV7 527 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RIMKLBQ9ULI2 386 aa13.44□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PLD2O14939 933 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CASC3O15234 703 aaKnown RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 LCMT2O60294 686 aaKnown RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ANGPTL1O95841 491 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 NPPBP16860 134 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CERS1P27544 350 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ARSFP54793 590 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SLAMF1Q13291 335 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SLC5A12Q1EHB4 618 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AGAP6Q5VW22 663 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TMEM107Q6UX40 140 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RBM45Q8IUH3 476 aaKnown RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AGAP4Q96P64 663 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MCCC1Q96RQ3 725 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AIF1LQ9BQI0 150 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SLC6A16Q9GZN6 736 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ZNF556Q9HAH1 456 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TIGARQ9NQ88 270 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AGPAT4Q9NRZ5 378 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RLIMQ9NVW2 624 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SEC14L3Q9UDX4 400 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MKLN1Q9UL63 735 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 OR6C74A6NCV1 312 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AREL1O15033 823 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 UPK1BO75841 260 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 LCKP06239 509 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 FHP07954 510 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 JUPP14923 745 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 VLDLRP98155 873 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TRAP1Q12931 704 aaKnown RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 XAF1Q6GPH4 301 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ARMC6Q6NXE6 501 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 TMEM203Q969S6 136 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 AIFM2Q9BRQ8 373 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 MAGEL2Q9UJ55 1249 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RUVBL1Q9Y265 456 aaKnown RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 ACACAQ13085 2346 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 WDFY3Q8IZQ1 3526 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 H0YJX3 145 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SLC22A1O15245 554 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 IGFBP1P08833 259 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CISD3P0C7P0 127 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 OPRD1P41143 372 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 RPL35P42766 123 aaKnown RBP13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 CBLBQ13191 982 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 PNCKQ6P2M8 343 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 DLEU7Q6UYE1 221 aa13.43□□□□□ -0.26
TNFRSF11A-201ENST00000269485 SHFQ7M4L6 423 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms