RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MAPK11Q15759 364 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 ZIC1Q15915 447 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 ABHD17CQ6PCB6 329 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 ZNF438Q7Z4V0 828 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 HIPK1Q86Z02 1210 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 EPS8L2Q9H6S3 715 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 NT5DC2Q9H857 520 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 REEP1Q9H902 201 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 NDUFAF4Q9P032 175 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 KIF17Q9P2E2 1029 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 LOC100130705A0A1B0GUX0 176 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 P2RX6O15547 441 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
VMP1-201ENST00000262291 AIFM1O95831 613 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 C7P10643 843 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 F3P13726 295 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 CCNA2P20248 432 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 HIST1H1TP22492 207 aaPredicted RBP12.84□□□□□ -0.35
VMP1-201ENST00000262291 CCT3P49368 545 aaKnown RBP12.84□□□□□ -0.35
VMP1-201ENST00000262291 PCBP4P57723 403 aaKnown RBP12.84□□□□□ -0.35
VMP1-201ENST00000262291 SELENOWP63302 87 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 CD47Q08722 323 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 SELENBP1Q13228 472 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 SLC9A5Q14940 896 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 DUSP7Q16829 419 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 VN1R4Q7Z5H5 301 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 C8orf59Q8N0T1 100 aaPredicted RBP12.84□□□□□ -0.35
VMP1-201ENST00000262291 SLC38A5Q8WUX1 472 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 OR5P2Q8WZ92 322 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 QRFPRQ96P65 431 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 BBS4Q96RK4 519 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 CTRCQ99895 268 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 MAPKAP1Q9BPZ7 522 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 C8orf4Q9NR00 106 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 STARD5Q9NSY2 213 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 KLHL3Q9UH77 587 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 HEBP2Q9Y5Z4 205 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 SPTBP11277 2137 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 LOC105369274A0A096LPK9 316 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 LOC102723532A0A0G2JNH3 316 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 H0YAE9 185 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 ZNF701M0R085 212 aaPredicted RBP12.84□□□□□ -0.35
VMP1-201ENST00000262291 KRT75O95678 551 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 OR12D1P0DN82 309 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 TYRP1P17643 537 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 LSSP48449 732 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 CDH12P55289 794 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 ILF3Q12906 894 aaKnown RBP eCLIP12.84□□□□□ -0.351e-7■■□□□ 14.5
VMP1-201ENST00000262291 RAPSNQ13702 412 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 USP43Q70EL4 1123 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 TAF8Q7Z7C8 310 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 OR4N5Q8IXE1 308 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 OR4N4Q8N0Y3 316 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 XAGE5Q8WWM1 108 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 OR2A14Q96R47 310 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 CENPOQ9BU64 300 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 LMAN1LQ9HAT1 526 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 EQTNQ9NQ60 294 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 RLIMQ9NVW2 624 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 ASB4Q9Y574 426 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 ORC6Q9Y5N6 252 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 AP1M2Q9Y6Q5 423 aa12.84□□□□□ -0.35
VMP1-201ENST00000262291 A6NCN8 305 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 NOTOA8MTQ0 251 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 PTGES3LE9PB15 166 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 FAM227AF5H4B4 570 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 HPRP00739 348 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 THEGLP0DJG4 465 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 POU2F1P14859 743 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 UGT2B7P16662 529 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 DNAJA1P31689 397 aaKnown RBP12.83□□□□□ -0.35
VMP1-201ENST00000262291 IL5RAQ01344 420 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 IFITM3Q01628 133 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 SPIBQ01892 262 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 ID2Q02363 134 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 TEAD4Q15561 434 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 SYPL1Q16563 259 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 FRMPD2BQ6IN97 320 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 ZNF425Q6IV72 752 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 FBXO42Q6P3S6 717 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 THAP5Q7Z6K1 395 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 DENND6BQ8NEG7 585 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 PJA1Q8NG27 643 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 CNRIP1Q96F85 164 aaPredicted RBP12.83□□□□□ -0.35
VMP1-201ENST00000262291 TMEM19Q96HH6 336 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 SLC6A18Q96N87 628 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 AMDHD1Q96NU7 426 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 WFDC6Q9BQY6 131 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 FOXQ1Q9C009 403 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 UBE2ZQ9H832 354 aaPredicted RBP12.83□□□□□ -0.35
VMP1-201ENST00000262291 SLC35C2Q9NQQ7 365 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 OR6C2Q9NZP2 312 aa12.83□□□□□ -0.35
VMP1-201ENST00000262291 C5orf58C9J3I9 102 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 BCKDKO14874 412 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 XPNPEP2O43895 674 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 KCNJ13O60928 360 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 VIPP01282 170 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 ARAFP10398 606 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 FPR1P21462 350 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms