RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 TLCD2A6NGC4 264 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 GMNNO75496 209 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 NTRK1P04629 796 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 GPIP06744 558 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ALOX12P18054 663 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 GABRA4P48169 554 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 MAPK10P53779 464 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 RUNX2Q13950 521 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 COL9A2Q14055 689 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 RGNQ15493 299 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ADRM1Q16186 407 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 COX20Q5RI15 118 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 LPCAT4Q643R3 524 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 SLC48A1Q6P1K1 146 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ARHGAP22Q7Z5H3 698 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 PDSS2Q86YH6 399 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 MCATQ8IVS2 390 aaKnown RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 KBTBD2Q8IY47 623 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ZNF655Q8N720 491 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 TRIML2Q8N7C3 387 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 TMEM102Q8N9M5 508 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 OR5AK3PQ8NH89 298 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 DNAJC9Q8WXX5 260 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 POP5Q969H6 163 aaKnown RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 TCTN2Q96GX1 697 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 DPH2Q9BQC3 489 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ASCL3Q9NQ33 180 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 SLC35C2Q9NQQ7 365 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 SIRT3Q9NTG7 399 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 ACSS1Q9NUB1 689 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-201ENST00000258962 UTS2RQ9UKP6 389 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 CORO2BQ9UQ03 480 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 RAXQ9Y2V3 346 aa16.45■□□□□ 0.22
SRSF1-201ENST00000258962 MN1Q10571 1320 aaPredicted RBP16.44■□□□□ 0.22
SRSF1-201ENST00000258962 IGHV5-51A0A0C4DH38 117 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 TOX3O15405 576 aaPredicted RBP16.44■□□□□ 0.22
SRSF1-201ENST00000258962 NUDT7P0C024 238 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 NR2F6P10588 404 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 ITIH1P19827 911 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 PSMA4P25789 261 aaKnown RBP16.44■□□□□ 0.22
SRSF1-201ENST00000258962 PEX2P28328 305 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 SOAT1P35610 550 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 CDK9P50750 372 aaKnown RBP16.44■□□□□ 0.22
SRSF1-201ENST00000258962 MANFP55145 182 aaKnown RBP16.44■□□□□ 0.22
SRSF1-201ENST00000258962 TNFRSF17Q02223 184 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 DUSP2Q05923 314 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 MLC1Q15049 377 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 TAF11Q15544 211 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 PRTGQ2VWP7 1150 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 MTX3Q5HYI7 312 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 ZC3H12BQ5HYM0 836 aaKnown RBP16.44■□□□□ 0.22
SRSF1-201ENST00000258962 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.44■□□□□ 0.22
SRSF1-201ENST00000258962 OR52E4Q8NGH9 312 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 OR52N2Q8NGI0 321 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 PSMA8Q8TAA3 256 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 ZBED6CLQ96FA7 236 aaPredicted RBP16.44■□□□□ 0.22
SRSF1-201ENST00000258962 ANAPC2Q9UJX6 822 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 AURKCQ9UQB9 309 aa16.44■□□□□ 0.22
SRSF1-201ENST00000258962 SCN2AQ99250 2005 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 ZNF860A6NHJ4 632 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 EFCAB7A8K855 629 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 MYO1GB0I1T2 1018 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 TAF4O00268 1085 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 RRP8O43159 456 aaKnown RBP16.43■□□□□ 0.22
SRSF1-201ENST00000258962 B3GALT2O43825 422 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 PEX1O43933 1283 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 CREG1O75629 220 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 TIPRLO75663 272 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 UMPSP11172 480 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 CCL4P13236 92 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 UQCRC2P22695 453 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 LIM2P55344 173 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 OLR1P78380 273 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 HSPB3Q12988 150 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 TRIP10Q15642 601 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 VMACQ2NL98 169 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 TBCELQ5QJ74 424 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 HMBOX1Q6NT76 420 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 SHISA5Q8N114 240 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 FAM86B1Q8N7N1 296 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 PAPD5Q8NDF8 572 aaKnown RBP16.43■□□□□ 0.22
SRSF1-201ENST00000258962 LRTOMTQ8WZ04 291 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 CNRIP1Q96F85 164 aaPredicted RBP16.43■□□□□ 0.22
SRSF1-201ENST00000258962 C10orf90Q96M02 699 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 AMDHD1Q96NU7 426 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 CD180Q99467 661 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 SPATA9Q9BWV2 254 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 GLIPR2Q9H4G4 154 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 NEUROD4Q9HD90 331 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 PHF11Q9UIL8 331 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 DAPP1Q9UN19 280 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 SLC22A7Q9Y694 548 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 V9GYQ6 96 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 FRYQ5TBA9 3013 aa16.43■□□□□ 0.22
SRSF1-201ENST00000258962 RNF103-CHMP3A0A140T963 221 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 A0A1W2PS29 197 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 CDRT15L2A8MXV6 281 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 GALR3O60755 368 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-201ENST00000258962 B4GALT2O60909 372 aa16.42■□□□□ 0.22
SRSF1-201ENST00000258962 TNFRSF21O75509 655 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms