RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TAGAPQ8N103 731 aa10.47□□□□□ -0.73
TNFAIP3-201ENST00000237289 VWA5B2Q8N398 1253 aa10.47□□□□□ -0.73
TNFAIP3-201ENST00000237289 SLC46A1Q96NT5 459 aa10.47□□□□□ -0.73
TNFAIP3-201ENST00000237289 YIPF4Q9BSR8 244 aa10.47□□□□□ -0.73
TNFAIP3-201ENST00000237289 GPR87Q9BY21 358 aa10.47□□□□□ -0.73
TNFAIP3-201ENST00000237289 ARMC7Q9H6L4 198 aa10.47□□□□□ -0.73
TNFAIP3-201ENST00000237289 XIRP2A4UGR9 3374 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 PCM1Q15154 2024 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 EMC8O43402 210 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 IFNA14P01570 189 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 FURINP09958 794 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 FAM219BQ5XKK7 198 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 MAVSQ7Z434 540 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 ST13P4Q8IZP2 240 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 THAP3Q8WTV1 239 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 CT55Q8WUE5 264 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 CIDECQ96AQ7 238 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 HOPXQ9BPY8 73 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 Q9N2J8 555 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 PCDHGA3Q9Y5H0 932 aa10.46□□□□□ -0.73
TNFAIP3-201ENST00000237289 CAPN14A8MX76 684 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 C21orf140B9A014 251 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 FOXS1O43638 330 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 REM1O75628 298 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 SEC24DO94855 1032 aaPredicted RBP10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 MSL3P1P0C860 447 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC35E2P0CK97 266 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 IL12BP29460 328 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 BTG2P78543 158 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 BLOC1S3Q6QNY0 202 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 KRT73Q86Y46 540 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 NUP43Q8NFH3 380 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR9A2Q8NGT5 310 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR14A16Q8NHC5 309 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 FBXO30Q8TB52 745 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 KCTD14Q9BQ13 255 aaPredicted RBP10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 ASIC5Q9NY37 505 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 ERVK-19Q9WJR5 959 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 CTSBP07858 339 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 CLCN2P51788 898 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 PSME3P61289 254 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 LASP1Q14847 261 aaKnown RBP10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 NKG7Q16617 165 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 TRMT5Q32P41 509 aaKnown RBP10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 FITM2Q8N6M3 262 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 AMER3Q8N944 861 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 SUN3Q8TAQ9 357 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 TESCQ96BS2 214 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 TMEM45AQ9NWC5 275 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 SEMA5BQ9P283 1151 aa10.46□□□□□ -0.74
TNFAIP3-201ENST00000237289 FITM1A5D6W6 292 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC28A2O43868 658 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 CYP7B1O75881 506 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 LIPCP11150 499 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 UQCRC2P22695 453 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 KHKP50053 298 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 INTS11Q5TA45 600 aaKnown RBP10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 TNFAIP8L2Q6P589 184 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 LZICQ8WZA0 190 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 CSF3RQ99062 836 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 ARL8BQ9NVJ2 186 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF232Q9UNY5 417 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 PLXND1Q9Y4D7 1925 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 CLIC1O00299 241 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 AGR2O95994 175 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 SPTBP11277 2137 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 KRT72Q14CN4 511 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 CDCP2Q5VXM1 449 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 HSDL2Q6YN16 418 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 FKBP9P1Q75LS8 142 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 ROPN1LQ96C74 230 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 RSRC1Q96IZ7 334 aaKnown RBP10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 CDRT15Q96T59 188 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 ATP13A2Q9NQ11 1180 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 ACSS1Q9NUB1 689 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 ASB4Q9Y574 426 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 PLXNB3Q9ULL4 1909 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 A6NL46 340 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 FGF17O60258 216 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 PRAMEF2O60811 474 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 TIAF1O95411 115 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC6A2P23975 617 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 MRPS22P82650 360 aaKnown RBP10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 SAMD4BQ5PRF9 694 aaKnown RBP10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 CGB2Q6NT52 195 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 MSANTD1Q6ZTZ1 278 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 CLECL1Q8IZS7 167 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 DTWD1Q8N5C7 304 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 HIPK4Q8NE63 616 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 TSLPQ969D9 159 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 LRFN5Q96NI6 719 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 CLMPQ9H6B4 373 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 SPAG4Q9NPE6 437 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 KLHL28Q9NXS3 571 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 ANGPT4Q9Y264 503 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 MAN2B2Q9Y2E5 1009 aa10.45□□□□□ -0.74
TNFAIP3-201ENST00000237289 RNASET2O00584 256 aaKnown RBP10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF28P17035 718 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 GPX3P22352 226 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 PTPN4P29074 926 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms