RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PCTPQ9UKL6 214 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 BCAT2O15382 392 aaPredicted RBP17.6■□□□□ 0.41
CLIP2-201ENST00000223398 CLIC3O95833 236 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 GSTT2BP0CG30 244 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 ETFAP13804 333 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 IRS1P35568 1242 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 ECH1Q13011 328 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 MRPL49Q13405 166 aaKnown RBP17.6■□□□□ 0.41
CLIP2-201ENST00000223398 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLIP2-201ENST00000223398 CD200R1Q8TD46 325 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 ATOH1Q92858 354 aaPredicted RBP17.6■□□□□ 0.41
CLIP2-201ENST00000223398 SLC22A12Q96S37 553 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 ZCWPW2A0A1B0GU75 182 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 H2BFMP0C1H6 154 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 RAB2AP61019 212 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 STEAP4Q687X5 459 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 KDELC1Q6UW63 502 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 ERMP1Q7Z2K6 904 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 SNX29P2Q8IUI4 249 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 SLC15A3Q8IY34 581 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 OR4C15Q8NGM1 316 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 TMEM41AQ96HV5 264 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 CD320Q9NPF0 282 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 DPPA5A6NC42 116 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 PLATP00750 562 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 GADD45AP24522 165 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 PTGER1P34995 402 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 PDZD3Q86UT5 571 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 MFSD6LQ8IWD5 586 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 GPALPP1Q8IXQ4 340 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 TMIEQ8NEW7 156 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 C9orf43Q8TAL5 461 aaPredicted RBP17.59■□□□□ 0.41
CLIP2-201ENST00000223398 SPPL3Q8TCT6 385 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 NR4A3Q92570 626 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 PCDHGA3Q9Y5H0 932 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 A0A0J9YY10 115 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 C5orf51A6NDU8 294 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 LAMP1P11279 417 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 TDGQ13569 410 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 DCBLD2Q96PD2 775 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 CITO14578 2027 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 SLC15A1P46059 708 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 EMP2P54851 167 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 ZNF613Q6PF04 617 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 DOHHQ9BU89 302 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 MARCH5Q9NX47 278 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 DNAJC15Q9Y5T4 150 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 CCNKO75909 580 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 CER1O95813 267 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 KIAA1614Q5VZ46 1190 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 ANKRD54Q6NXT1 300 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 TOR1AIP2Q8NFQ8 470 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 FBXL8Q96CD0 374 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 CSNK1G1Q9HCP0 422 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 PAK6Q9NQU5 681 aaPredicted RBP17.59■□□□□ 0.41
CLIP2-201ENST00000223398 GON4LQ3T8J9 2241 aa17.59■□□□□ 0.41
CLIP2-201ENST00000223398 A6NLC8 198 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 KDM4BO94953 1096 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 ARG2P78540 354 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 FAM189BP81408 668 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 FADDQ13158 208 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 MPP2Q14168 576 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 MPP7Q5T2T1 576 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 ATG9BQ674R7 924 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 PRSS21Q9Y6M0 314 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 C17orf105B2RV13 164 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 GPR4P46093 362 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 ARPC4P59998 168 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 DLX2Q07687 328 aaPredicted RBP17.58■□□□□ 0.41
CLIP2-201ENST00000223398 UGT3A2Q3SY77 523 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 C4orf46Q504U0 113 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 ARHGAP12Q8IWW6 846 aa17.58■□□□□ 0.41
CLIP2-201ENST00000223398 ISG20Q96AZ6 181 aaKnown RBP17.58■□□□□ 0.41
CLIP2-201ENST00000223398 BCAS2O75934 225 aaPredicted RBP17.58■□□□□ 0.4
CLIP2-201ENST00000223398 SFTPDP35247 375 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 NADSYN1Q6IA69 706 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 ZNF782Q6ZMW2 699 aaPredicted RBP17.58■□□□□ 0.4
CLIP2-201ENST00000223398 LRRC69Q6ZNQ3 347 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 ARFGAP1Q8N6T3 406 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 OR8J3Q8NGG0 315 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 MAL2Q969L2 176 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 TMEM80Q96HE8 168 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 NAA11Q9BSU3 229 aaPredicted RBP17.58■□□□□ 0.4
CLIP2-201ENST00000223398 IRF2BPLQ9H1B7 796 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.58■□□□□ 0.4
CLIP2-201ENST00000223398 MTRF1O75570 445 aaKnown RBP17.58■□□□□ 0.4
CLIP2-201ENST00000223398 GPR143P51810 404 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 GSCP56915 257 aaPredicted RBP17.58■□□□□ 0.4
CLIP2-201ENST00000223398 PRKCDQ05655 676 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 SIX1Q15475 284 aaPredicted RBP17.58■□□□□ 0.4
CLIP2-201ENST00000223398 TSC22D1Q15714 1073 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 DEFB123Q8N688 67 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 ZBP1Q9H171 429 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 RDH14Q9HBH5 336 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 CPNE7Q9UBL6 633 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 PSKH1P11801 424 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 SHQ1Q6PI26 577 aaKnown RBP17.58■□□□□ 0.4
CLIP2-201ENST00000223398 GAREM2Q75VX8 874 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 PTERQ96BW5 349 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 BORCS8Q96FH0 119 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms