RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PAIP2Q9BPZ3 127 aaKnown RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 UTP23Q9BRU9 249 aaKnown RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 FAIM2Q9BWQ8 316 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 HES7Q9BYE0 225 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 EML4Q9HC35 981 aaKnown RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 RYDENQ9NUL5 291 aaKnown RBP11.79□□□□□ -0.52
LSM5-201ENST00000223084 ASF1BQ9NVP2 202 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 ZDHHC2Q9UIJ5 367 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 ERVK-19Q9WJR5 959 aa11.79□□□□□ -0.52
LSM5-201ENST00000223084 TMEM120BA0PK00 339 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 GOLGA6L10A6NI86 522 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 WWP2O00308 870 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 FCHO1O14526 889 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 PIP5K1BO14986 540 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 BIRC5O15392 142 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 PRAMEF2O60811 474 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 SEC22BO75396 215 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 ITGA10O75578 1167 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 RSL1D1O76021 490 aaKnown RBP11.78□□□□□ -0.52
LSM5-201ENST00000223084 CHEK2O96017 543 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 IGKV3-11P04433 115 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 FGF4P08620 206 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 ANXA4P09525 319 aaPredicted RBP11.78□□□□□ -0.52
LSM5-201ENST00000223084 CT62P0C5K7 136 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 SLC35E2P0CK97 266 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 CPMP14384 443 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 BGNP21810 368 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 SERPINB5P36952 375 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 WDR4P57081 412 aaKnown RBP11.78□□□□□ -0.52
LSM5-201ENST00000223084 RNF4P78317 190 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 DUSP2Q05923 314 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 BIKQ13323 160 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 NR6A1Q15406 480 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 OR1C1Q15619 314 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 GALNT18Q6P9A2 607 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 HSDL2Q6YN16 418 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 DDIASQ8IXT1 998 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 MDS2Q8NDY4 140 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 C7orf57Q8NEG2 295 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 MGARPQ8TDB4 240 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 ARL8AQ96BM9 186 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 TLCD1Q96CP7 247 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 KLHL29Q96CT2 875 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 CNRIP1Q96F85 164 aaPredicted RBP11.78□□□□□ -0.52
LSM5-201ENST00000223084 PELOQ9BRX2 385 aaKnown RBP11.78□□□□□ -0.52
LSM5-201ENST00000223084 C20orf27Q9GZN8 174 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 STMN4Q9H169 189 aaPredicted RBP11.78□□□□□ -0.52
LSM5-201ENST00000223084 LRTM1Q9HBL6 345 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 KLHL1Q9NR64 748 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 SIRT5Q9NXA8 310 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 GIMAP2Q9UG22 337 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 COPG1Q9Y678 874 aaKnown RBP11.78□□□□□ -0.52
LSM5-201ENST00000223084 ESPL1Q14674 2120 aa11.78□□□□□ -0.52
LSM5-201ENST00000223084 ZGRF1Q86YA3 2104 aa11.77□□□□□ -0.52
LSM5-201ENST00000223084 RGS14O43566 566 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 DYRK3O43781 588 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 SKAP2O75563 359 aaPredicted RBP11.77□□□□□ -0.53
LSM5-201ENST00000223084 OR2J2O76002 312 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 NEURL1O76050 574 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 WISP1O95388 367 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 HSPA4LO95757 839 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 CLPSP04118 112 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 SERPINE1P05121 402 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 NEFHP12036 1026 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 H2AFXP16104 143 aaPredicted RBP11.77□□□□□ -0.53
LSM5-201ENST00000223084 PORP16435 677 aaPredicted RBP11.77□□□□□ -0.53
LSM5-201ENST00000223084 NT5EP21589 574 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 SSTR4P31391 388 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 HK2P52789 917 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 ABCE1P61221 599 aaKnown RBP11.77□□□□□ -0.53
LSM5-201ENST00000223084 ZNF763Q0D2J5 394 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 C2orf80Q0P641 193 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 KIAA0040Q15053 153 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 PRSS53Q2L4Q9 553 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 SPRED3Q2MJR0 410 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 ZNF766Q5HY98 468 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 HHATQ5VTY9 493 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 NOXRED1Q6NXP6 359 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 FAM111BQ6SJ93 734 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 ZNF227Q86WZ6 799 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 C9orf40Q8IXQ3 194 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 ARMC10Q8N2F6 343 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 SUN3Q8TAQ9 357 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 GRHL3Q8TE85 626 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 EXOSC8Q96B26 276 aaKnown RBP11.77□□□□□ -0.53
LSM5-201ENST00000223084 FBXL20Q96IG2 436 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 C3orf30Q96M34 536 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 CXorf21Q9HAI6 301 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 PFDN4Q9NQP4 134 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 C1orf109Q9NX04 203 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 LRFN1Q9P244 771 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 MYOTQ9UBF9 498 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 COPS7AQ9UBW8 275 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 UTS2RQ9UKP6 389 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 PSME2Q9UL46 239 aa11.77□□□□□ -0.53
LSM5-201ENST00000223084 EML6Q6ZMW3 1958 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 SPENQ96T58 3664 aaKnown RBP11.76□□□□□ -0.53
LSM5-201ENST00000223084 TMEM114B3SHH9 223 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 NPIPB8E9PQR5 432 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 LSM1O15116 133 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms