RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 RHOUQ7L0Q8 258 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 MAMDC2Q7Z304 686 aaPredicted RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 DNAJB7Q7Z6W7 309 aaPredicted RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 PHYKPLQ8IUZ5 450 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 MCATQ8IVS2 390 aaKnown RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 KRT78Q8N1N4 520 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 IL17RCQ8NAC3 791 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 GGHQ92820 318 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 TBC1D20Q96BZ9 403 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 CRELD1Q96HD1 420 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 TEX37Q96LM6 180 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 MID1IP1Q9NPA3 183 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 UFSP2Q9NUQ7 469 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 LHX3Q9UBR4 397 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 PPIEQ9UNP9 301 aaKnown RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 FNDC3AQ9Y2H6 1198 aaKnown RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 CDH10Q9Y6N8 788 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 GLYATL1P3A0A0U1RQE8 302 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 A0A1W2PQL4 384 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 CLCA1A8K7I4 914 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 LZTS3O60299 673 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 RASGRP1O95267 797 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 S100A8P05109 93 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 SMAD3P84022 425 aaKnown RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 CRYZQ08257 329 aaKnown RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 TSNQ15631 228 aaKnown RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 SPDYE7PQ495Y7 208 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 FBXO48Q5FWF7 155 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ANKRD33Q7Z3H0 272 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 RAB44Q7Z6P3 723 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ZER1Q7Z7L7 766 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 LNX2Q8N448 690 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 C12orf45Q8N5I9 185 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ATP6V1C2Q8NEY4 427 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 WFDC5Q8TCV5 224 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ADAMTS19Q8TE59 1207 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 AUTS2Q8WXX7 1259 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 HGDQ93099 445 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 KCNA7Q96RP8 456 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 BARD1Q99728 777 aaKnown RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 PDCD10Q9BUL8 212 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ADGRE3Q9BY15 652 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ZDHHC4Q9NPG8 344 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 SLCO1C1Q9NYB5 712 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 SEC14L4Q9UDX3 406 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 GPR45Q9Y5Y3 372 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 A0A1B0GTL3 188 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 SUPT3HB4E1H0 165 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 H3BM21 787 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 CDC7O00311 574 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 AZIN1O14977 448 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 FGF4P08620 206 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 STSP08842 583 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 NMBP08949 121 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 CKMT1AP12532 417 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 PGDP52209 483 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 DIO3P55073 304 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 RPS7P62081 194 aaKnown RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 BTG1P62324 171 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 DEFA5Q01523 94 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 CTSL3PQ5NE16 218 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 HSD17B13Q7Z5P4 300 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 PGBD3Q8N328 593 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 TMEM132CQ8N3T6 1108 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 DNAJC22Q8N4W6 341 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 STAG3L4Q8TBR4 150 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 POF1BQ8WVV4 589 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 SLC38A2Q96QD8 506 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 NKX6-2Q9C056 277 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ZNF334Q9HCZ1 680 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 SPASTQ9UBP0 616 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 FCF1Q9Y324 198 aaKnown RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 SLC6A5Q9Y345 797 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 RNF215Q9Y6U7 377 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 PRRG1O14668 218 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 PIP5K1BO14986 540 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ECI2O75521 394 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 PRAMEF12O95522 483 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 KLK3P07288 261 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 CD63P08962 238 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 PKMP14618 531 aaKnown RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 DNASE1P24855 282 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 HOXA6P31267 233 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 HOXA9P31269 272 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 GPX4P36969 197 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 KCNJ3P48549 501 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 PSMD4P55036 377 aaKnown RBP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 BPIFB3P59826 476 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 TLE2Q04725 743 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 DMC1Q14565 340 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 PUM1Q14671 1186 aaKnown RBP eCLIP12.97□□□□□ -0.33
GABPB1-201ENST00000220429 KANK2Q63ZY3 851 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 CPZQ66K79 652 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ZNF783Q6ZMS7 281 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 GCNT7Q6ZNI0 430 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 USP53Q70EK8 1073 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 ZNF367Q7RTV3 350 aa12.97□□□□□ -0.33
GABPB1-201ENST00000220429 SLC39A11Q8N1S5 342 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms