RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ZNF681Q96N22 645 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 GAS2L1Q99501 681 aaPredicted RBP28.03■■■□□ 2.08
PABPN1-201ENST00000216727 LMAN1LQ9HAT1 526 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 SLC1A7O00341 560 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 ZNF217O75362 1048 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 NR2F6P10588 404 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 PUM1Q14671 1186 aaKnown RBP eCLIP28.02■■■□□ 2.08
PABPN1-201ENST00000216727 SMAD2Q15796 467 aaKnown RBP28.02■■■□□ 2.08
PABPN1-201ENST00000216727 OR10G2Q8NGC3 310 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 OR56A1Q8NGH5 318 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 SLC37A2Q8TED4 501 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 FEVQ99581 238 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 PSD2Q9BQI7 771 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 ACER3Q9NUN7 267 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 A0A0J9YVX5 310 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 FHP07954 510 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 AGXTP21549 392 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 BLKP51451 505 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 DUSP2Q05923 314 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 ZNF542PQ5EBM4 170 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 SZRD1Q7Z422 152 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 TAF8Q7Z7C8 310 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 FRMD1Q8N878 549 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 CAMKVQ8NCB2 501 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 MIPOL1Q8TD10 442 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 SERINC2Q96SA4 455 aa28.02■■■□□ 2.08
PABPN1-201ENST00000216727 TREX2Q9BQ50 279 aaPredicted RBP28.02■■■□□ 2.08
PABPN1-201ENST00000216727 PRAMEF27A3QJZ7 478 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 SLC28A2O43868 658 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 CELA2BP08218 269 aaPredicted RBP28.01■■■□□ 2.07
PABPN1-201ENST00000216727 CXCR4P61073 352 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 GPR19Q15760 415 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 EXOC3L2Q2M3D2 409 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 ZNF750Q32MQ0 723 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 GPR32P1Q8NGA4 272 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 KLHDC7BQ96G42 594 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 ZFYVE21Q9BQ24 234 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 PHF11Q9UIL8 331 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 KCND3Q9UK17 655 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 ZNF780BQ9Y6R6 833 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 J3KTA2 159 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 P2RX6O15547 441 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 SERPINB7O75635 380 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 PPP2R1BP30154 601 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 SLC5A2P31639 672 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 FEN1P39748 380 aaKnown RBP28.01■■■□□ 2.07
PABPN1-201ENST00000216727 RAB39AQ14964 217 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 SLC5A8Q8N695 610 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 OR5D16Q8NGK9 328 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 BAHD1Q8TBE0 780 aaPredicted RBP28.01■■■□□ 2.07
PABPN1-201ENST00000216727 XAGE5Q8WWM1 108 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 PROX1Q92786 737 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 CNDP2Q96KP4 475 aaKnown RBP28.01■■■□□ 2.07
PABPN1-201ENST00000216727 CXorf21Q9HAI6 301 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 PRDM9Q9NQV7 894 aa28.01■■■□□ 2.07
PABPN1-201ENST00000216727 GPC6Q9Y625 555 aaPredicted RBP28.01■■■□□ 2.07
PABPN1-201ENST00000216727 CTSEP14091 401 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 EPHA2P29317 976 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 BUD31P41223 144 aaPredicted RBP28■■■□□ 2.07
PABPN1-201ENST00000216727 KCNJ5P48544 419 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 PXNP49023 591 aaPredicted RBP28■■■□□ 2.07
PABPN1-201ENST00000216727 PRR5P85299 388 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 GAS6Q14393 721 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 SYPL1Q16563 259 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 PARGQ86W56 976 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 RBM12BQ8IXT5 1001 aaKnown RBP28■■■□□ 2.07
PABPN1-201ENST00000216727 LGI4Q8N135 537 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 OR52J3Q8NH60 311 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 RSC1A1Q92681 617 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 HRASLS5Q96KN8 279 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 C10orf90Q96M02 699 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 BCL2L10Q9HD36 194 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 HRASLS2Q9NWW9 162 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 KCMF1Q9P0J7 381 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 TRPC4Q9UBN4 977 aa28■■■□□ 2.07
PABPN1-201ENST00000216727 IGHV1OR15-9A0A0B4J2B8 117 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 C8orf89P0DMQ9 161 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 RPP38P78345 283 aaKnown RBP27.99■■■□□ 2.07
PABPN1-201ENST00000216727 ROR2Q01974 943 aaKnown RBP27.99■■■□□ 2.07
PABPN1-201ENST00000216727 TNFRSF17Q02223 184 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 CNIH3Q8TBE1 160 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 KLHL6Q8WZ60 621 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 RSPO3Q9BXY4 272 aaPredicted RBP27.99■■■□□ 2.07
PABPN1-201ENST00000216727 DUSP12Q9UNI6 340 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 NAALAD2Q9Y3Q0 740 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 A0A0J9YY10 115 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 EMC8O43402 210 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 NDUFS2O75306 463 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 ANGPTL1O95841 491 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 HMGN2P05204 90 aaKnown RBP27.99■■■□□ 2.07
PABPN1-201ENST00000216727 NR2F1P10589 423 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 ZNF10P21506 573 aaPredicted RBP27.99■■■□□ 2.07
PABPN1-201ENST00000216727 DGLUCYQ7Z3D6 616 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 SPARTQ8N0X7 666 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 ZNF354BQ96LW1 612 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 EVA1BQ9NVM1 165 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 POFUT2Q9Y2G5 429 aa27.99■■■□□ 2.07
PABPN1-201ENST00000216727 ARRDC5A6NEK1 342 aa27.98■■■□□ 2.07
PABPN1-201ENST00000216727 GADD45GO95257 159 aa27.98■■■□□ 2.07
PABPN1-201ENST00000216727 LSSP48449 732 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms