RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SPACA7Q96KW9 195 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 BARD1Q99728 777 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 IER2Q9BTL4 223 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 OR51I1Q9H343 314 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 RUBCNLQ9H714 662 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PDP1Q9P0J1 537 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 LYVE1Q9Y5Y7 322 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 UNC80Q8N2C7 3258 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 SPTBN5Q9NRC6 3674 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 C19orf67A6NJJ6 358 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 E9PQ18 207 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 ASNA1O43681 348 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 SH3BP5O60239 455 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 PRAMEF10O60809 474 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 IFI6P09912 130 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 CDH2P19022 906 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 MATN1P21941 496 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 CPN2P22792 545 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 ALDH3B2P48448 385 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 DAPP51397 102 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 HMGA2P52926 109 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 SNRPNP63162 240 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 GNA13Q14344 377 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 DEFB134Q4QY38 66 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 BORAQ6PGQ7 559 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 OGFOD3Q6PK18 319 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 ISLR2Q6UXK2 745 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 USP53Q70EK8 1073 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 DEFB119Q8N690 84 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 CSNK1A1LQ8N752 337 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 FBLIM1Q8WUP2 373 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 DNASE2BQ8WZ79 361 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 RAB8BQ92930 207 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 ELP4Q96EB1 424 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF607Q96SK3 696 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 PIP5K1AQ99755 562 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 PSD2Q9BQI7 771 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 NPLQ9BXD5 320 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 C3orf14Q9HBI5 128 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 DDX18Q9NVP1 670 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 ENPP4Q9Y6X5 453 aa13.49□□□□□ -0.25
RTFDC1-201ENST00000023939 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 PRAMEF27A3QJZ7 478 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 K7ESF4 209 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 AXIN1O15169 862 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 UGT2B11O75310 529 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 RECKO95980 971 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 OR12D1P0DN82 309 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 ATP6V1B1P15313 513 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 RHCEP18577 417 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 RRM2P31350 389 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 RYKP34925 604 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 PIGAP37287 484 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 FEN1P39748 380 aaKnown RBP13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 MAZP56270 477 aaKnown RBP13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 HNRNPKP61978 463 aaKnown RBP eCLIP13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 GPR19Q15760 415 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF750Q32MQ0 723 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 MAMSTRQ6ZN01 415 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 Q7L0L9 218 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 DGLUCYQ7Z3D6 616 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF605Q86T29 641 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 LGI4Q8N135 537 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 ARHGEF39Q8N4T4 335 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 OR4K14Q8NGD5 310 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 BBS10Q8TAM1 723 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 ZCCHC10Q8TBK6 192 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 LMX1AQ8TE12 382 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 MYCBPQ99417 103 aaPredicted RBP13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 TREX2Q9BQ50 279 aaPredicted RBP13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 KLHL25Q9H0H3 589 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 EXD2Q9NVH0 621 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 GPC6Q9Y625 555 aaPredicted RBP13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 HSPE1-MOB4S4R3N1 261 aa13.48□□□□□ -0.25
RTFDC1-201ENST00000023939 LMO7DNF2Z398 122 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 TNFRSF11BO00300 401 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 GALR3O60755 368 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 SERPINB7O75635 380 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 UBXN7O94888 489 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 HMGN2P05204 90 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 ETS2P15036 469 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 MAOBP27338 520 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 PPP2R1BP30154 601 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 LIMS1P48059 325 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 CXCL12P48061 93 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 KCNJ5P48544 419 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 HLCSP50747 726 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 PPP1CAP62136 330 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 KEAP1Q14145 624 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 DUSP7Q16829 419 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 NADK2Q4G0N4 442 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 RPS26P11Q5JNZ5 115 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 RBM48Q5RL73 367 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF691Q5VV52 312 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 SATL1Q86VE3 508 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF761Q86XN6 746 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 LRRC25Q8N386 305 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 C19orf47Q8N9M1 422 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 GPR32P1Q8NGA4 272 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms