RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 C14orf28Q4W4Y0 310 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 RPL22L1Q6P5R6 122 aaKnown RBP5.84□□□□□ -1.47
VPS13D-201ENST00000011700 KIAA1324Q6UXG2 1013 aaKnown RBP5.84□□□□□ -1.47
VPS13D-201ENST00000011700 CYP4V2Q6ZWL3 525 aaPredicted RBP5.84□□□□□ -1.47
VPS13D-201ENST00000011700 SYT13Q7L8C5 426 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 GALNT5Q7Z7M9 940 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 ELMOD2Q8IZ81 293 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 NSMAFQ92636 917 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 PMM1Q92871 262 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 FXYD6Q9H0Q3 95 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 LRFN1Q9P244 771 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 GNG8Q9UK08 70 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 N6AMT1Q9Y5N5 214 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 CLEC3AO75596 197 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 MT-CO1P00395 513 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 ADAP00813 363 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 DNASE1P24855 282 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 NRLP54845 237 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 OR12D2P58182 307 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 CYP4F8P98187 520 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 SERTAD2Q14140 314 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 RAP1GAP2Q684P5 730 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 SLC22A25Q6T423 547 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 ANKRD13BQ86YJ7 626 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 C12orf45Q8N5I9 185 aaPredicted RBP5.84□□□□□ -1.47
VPS13D-201ENST00000011700 OR8K5Q8NH50 307 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 RNF170Q96K19 258 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 LRFN5Q96NI6 719 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 IL36AQ9UHA7 158 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 FZD10Q9ULW2 581 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 MEN1O00255 615 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 LILRB3O75022 631 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 TACR2P21452 398 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 MAP2K3P46734 347 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 GDI2P50395 445 aaKnown RBP5.84□□□□□ -1.47
VPS13D-201ENST00000011700 DAP3P51398 398 aaKnown RBP5.84□□□□□ -1.47
VPS13D-201ENST00000011700 RAB40BQ12829 278 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 SNTB2Q13425 540 aaKnown RBP5.84□□□□□ -1.47
VPS13D-201ENST00000011700 GPR139Q6DWJ6 353 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 SERPINA12Q8IW75 414 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 STEAP2Q8NFT2 490 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 CD300LFQ8TDQ1 290 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 CMSS1Q9BQ75 279 aaKnown RBP5.84□□□□□ -1.47
VPS13D-201ENST00000011700 RNF215Q9Y6U7 377 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 OR5K3A6NET4 321 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 FAM159BA6NKW6 160 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 YDJCA8MPS7 323 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 H2AFB2P0C5Z0 115 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 DDCP20711 480 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 RANP62826 216 aaKnown RBP5.84□□□□□ -1.47
VPS13D-201ENST00000011700 TCTE1Q5JU00 501 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 DPY19L3Q6ZPD9 716 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 HFE2Q6ZVN8 426 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 GPR149Q86SP6 731 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF280BQ86YH2 543 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 PHC2Q8IXK0 858 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 SAMD12Q8N8I0 201 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 NGBQ9NPG2 151 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 SIRPGQ9P1W8 387 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 SALL3Q9BXA9 1300 aa5.84□□□□□ -1.47
VPS13D-201ENST00000011700 SBF1O95248 1867 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 CACNA1GO43497 2377 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 MYF6P23409 242 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 NFYAP23511 347 aaPredicted RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 CRABP1P29762 137 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 STC1P52823 247 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 TRA2BP62995 288 aaKnown RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 SIM2Q14190 667 aaPredicted RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 KCNJ11Q14654 390 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 C4orf17Q53FE4 359 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 ABHD15Q6UXT9 468 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 SLC22A8Q8TCC7 542 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 GTPBP3Q969Y2 492 aaKnown RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 TRIM43Q96BQ3 446 aaPredicted RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 SNX27Q96L92 541 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 ARHGAP9Q9BRR9 750 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 OARD1Q9Y530 152 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 EME2A4GXA9 379 aaPredicted RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 NPIPA2E9PIF3 369 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 NPIPA3F8WFD2 350 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 NDUFS4O43181 175 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 TSPAN3O60637 253 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 WDPCPO95876 746 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 PROS1P07225 676 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 METTL15P1P0C7V9 234 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 ATP1B2P14415 290 aaPredicted RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 EFNA1P20827 205 aaPredicted RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 LRP8Q14114 963 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 DCP2Q8IU60 420 aaKnown RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 GCDHQ92947 438 aaPredicted RBP5.84□□□□□ -1.48
VPS13D-201ENST00000011700 DDIT4LQ96D03 193 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 CHRDL1Q9BU40 450 aa5.84□□□□□ -1.48
VPS13D-201ENST00000011700 C1orf226A1L170 272 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 INMT-MINDY4F8WBC2 141 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 K7EQM0 130 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ETV1P50549 477 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF460Q14592 562 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 RBMS3Q6XE24 437 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 NCCRP1Q6ZVX7 275 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR4K17Q8NGC6 315 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms