RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Mapre3Q6PER3 281 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mgat4bQ812F8 548 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Prdx6bQ8BG37 224 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Luzp2Q8BGY3 345 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Q8BHB7 409 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Chrnb3Q8BMN3 464 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 IfnzQ8BQT1 182 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 CptpQ8BS40 216 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Klhl12Q8BZM0 568 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Q8C3W1 322 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Samd7Q8C8Y5 445 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm13278Q8CD73 182 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mptx1Q8R1M8 219 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Znf639Q99KZ6 485 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Q9CQF4 240 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mospd2Q9CWP6 518 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Q9CWU4 180 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Exo5Q9CXP9 373 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Sohlh2Q9D489 467 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Slco6d1Q9D5W6 683 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Slc22a17Q9D9E0 401 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Jph1Q9ET80 660 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Hapln1Q9QUP5 356 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tcea2Q9QVN7 299 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Skp2Q9Z0Z3 424 aa9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 HnrnpdlQ9Z130 301 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Btbd35f21A0A140T8Q5 498 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Slc9a6A1L3P4 702 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn1r184E9Q2N4 314 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Btbd35f22J3QN64 498 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cdk2ap1O35207 114 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cyp2j5O54749 501 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 JtbO88824 146 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 IduaP48441 634 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 CntfP51642 198 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 VaspP70460 375 aaKnown RBP9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Taf1aP97357 453 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ankrd28Q505D1 1053 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Zdhhc20Q5Y5T1 380 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 AktipQ64362 292 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 AY358078Q6UY53 465 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 BC024139Q8BVJ3 772 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Sall4Q8BX22 1067 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Q8C0X8 640 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm42417Q8K1D0 126 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 CipcQ8R0W1 432 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 DhrsxQ8VBZ0 335 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr1033Q8VFK5 310 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 NoboxQ8VIH1 527 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ptges3lQ9D9A7 131 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Adam21Q9JI76 729 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 A6H6Q4 206 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 CrnnD3YUU6 520 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rhox13F6YCR7 232 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr631F8VPJ9 319 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm8229K7N749 213 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Zp2P20239 713 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cav3P51637 151 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cxcr4P70658 359 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fam98aQ3TJZ6 515 aaKnown RBP9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fcho2Q3UQN2 809 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Bpifb1Q61114 474 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ppp3r2Q63811 179 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 ToxQ66JW3 526 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ubr7Q8BU04 425 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ccm2Q8K2Y9 453 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 NrarpQ91ZA8 114 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Sntg1Q925E1 517 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nkiras2Q9CR56 191 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Dhrs7Q9CXR1 338 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ube2fQ9CY34 185 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rhox2aQ9D4Y3 191 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Capns2Q9D7J7 247 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Znrf4Q9DAH2 327 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Aif1lQ9EQX4 150 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Alyref2Q9JJW6 218 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Myg1Q9JK81 380 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Clec1bQ9JL99 229 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Kcnk7Q9Z2T1 307 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 BC034090A0A087WP46 1202 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fam46aD3Z5S8 447 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tcp10cE9Q046 482 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tex264E9Q137 309 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Spata31d1cE9QAF1 853 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm21319F6YNI8 144 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Foxd2O35392 492 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ltb4rO88855 351 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ctla2bP12400 113 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 BckdhaP50136 442 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 StsP50427 624 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Slc16a3P57787 470 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tigd2Q0VBL1 525 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm14226Q3TZL0 686 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Taar8aQ5QD07 344 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Taar7eQ5QD09 358 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Paqr9Q6TCG2 375 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Acat3Q80X81 397 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Zik1Q80YP6 463 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Lrrtm2Q8BGA3 515 aa9.29□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Elp6Q8BK75 266 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms