RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 WNT3P56703 355 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 KCNK10P57789 538 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 PHC1P78364 1004 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 LRRC74AQ0VAA2 488 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 UBAP2LQ14157 1087 aaKnown RBP11.55□□□□□ -0.56
LINC00339-213ENST00000642137 MLC1Q15049 377 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 MAPRE2Q15555 327 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 TGIF1Q15583 401 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 NSDHLQ15738 373 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 MPEG1Q2M385 716 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 FAM174BQ3ZCQ3 159 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 SPANXN4Q5MJ08 99 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 FAM91A1Q658Y4 838 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 OR4F3Q6IEY1 312 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 ANKRD26P1Q6NSI1 321 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 SHISA6Q6ZSJ9 500 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 MSANTD1Q6ZTZ1 278 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 CCDC116Q8IYX3 515 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 ST13P4Q8IZP2 240 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-213ENST00000642137 ZNF248Q8NDW4 579 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 RP9Q8TA86 221 aaKnown RBP11.55□□□□□ -0.56
LINC00339-213ENST00000642137 METTL21AQ8WXB1 218 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 KIAA1143Q96AT1 154 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-213ENST00000642137 RBM18Q96H35 190 aaKnown RBP11.55□□□□□ -0.56
LINC00339-213ENST00000642137 BBS4Q96RK4 519 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 PELOQ9BRX2 385 aaKnown RBP11.55□□□□□ -0.56
LINC00339-213ENST00000642137 CRB3Q9BUF7 120 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 DPH1Q9BZG8 443 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 ACSS1Q9NUB1 689 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-213ENST00000642137 C5AR2Q9P296 337 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 ENTPD4Q9Y227 616 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 CAPN7Q9Y6W3 813 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 CFAP54Q96N23 3096 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 A0A1W2PRB8 838 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 CCDC154A6NI56 674 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 TGFBR3LH3BV60 316 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 RNASET2O00584 256 aaKnown RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 PDPK1O15530 556 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 TLX3O43711 291 aaPredicted RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 CREG1O75629 220 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 CAPNS1P04632 268 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 SNRPB2P08579 225 aaKnown RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 C8orf89P0DMQ9 161 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 MAOAP21397 527 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 MMP11P24347 488 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 NTSP30990 170 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 FEN1P39748 380 aaKnown RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 STT3AP46977 705 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 EFNA3P52797 238 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 DGKQP52824 942 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 MANFP55145 182 aaKnown RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 ID2Q02363 134 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 CLN3Q13286 438 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 RCAN2Q14206 197 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 CPZQ66K79 652 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 ANKRD37Q7Z713 158 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 LRRC25Q8N386 305 aaPredicted RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 FITM2Q8N6M3 262 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 SNIP1Q8TAD8 396 aaKnown RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 GATA6Q92908 595 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 TSLPQ969D9 159 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 SPDL1Q96EA4 605 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 ZBED6CLQ96FA7 236 aaPredicted RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 SLC45A3Q96JT2 553 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 OR52E6Q96RD3 313 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 GLIPR2Q9H4G4 154 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 CCDC86Q9H6F5 360 aaKnown RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 GPN2Q9H9Y4 310 aaPredicted RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 FAM120CQ9NX05 1096 aaKnown RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 ARMCX1Q9P291 453 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 C19orf25Q9UFG5 118 aaPredicted RBP11.54□□□□□ -0.56
LINC00339-213ENST00000642137 BTNL2Q9UIR0 455 aa11.54□□□□□ -0.56
LINC00339-213ENST00000642137 LOC102723996A0A087X1L8 192 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 MYOCOSA0A1B0GUC4 107 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 A0A1W2PP18 115 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 CAPN14A8MX76 684 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 SLITRK5O94991 958 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 IFNA16P05015 189 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 ATP1B1P05026 303 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 PRDX6P30041 224 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 FOXL2P58012 376 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 OR4D2P58180 307 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 PLIN5Q00G26 463 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 MAP4K2Q12851 820 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 STX5Q13190 355 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 CYLC2Q14093 348 aaPredicted RBP11.53□□□□□ -0.56
LINC00339-213ENST00000642137 TLR1Q15399 786 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 ZNF750Q32MQ0 723 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 FAAH2Q6GMR7 532 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 FAM180BQ6P0A1 224 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 GK5Q6ZS86 529 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 CPEB2Q7Z5Q1 589 aaKnown RBP11.53□□□□□ -0.56
LINC00339-213ENST00000642137 TMEM151BQ8IW70 566 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 ZFP28Q8NHY6 868 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 SUN3Q8TAQ9 357 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 KCNE4Q8WWG9 221 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 OR5P2Q8WZ92 322 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 CIDECQ96AQ7 238 aaPredicted RBP11.53□□□□□ -0.56
LINC00339-213ENST00000642137 VPS50Q96JG6 964 aa11.53□□□□□ -0.56
LINC00339-213ENST00000642137 AMDHD1Q96NU7 426 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms