RNA–Protein interactions for RNA: ENST00000640313.1

VPS35-212, Transcript of VPS35, retromer complex component, humanhuman

TSL 5 BASIC

Gene VPS35, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-212ENST00000640313 FAM219BQ5XKK7 198 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 REP15Q6BDI9 236 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 UFSP1Q6NVU6 142 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 IL34Q6ZMJ4 242 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 ADAMTSL5Q6ZMM2 481 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 ZNF730Q6ZMV8 503 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 MACC1Q6ZN28 852 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 Q6ZRG5 221 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 C11orf57Q6ZUT1 292 aaPredicted RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 PRSS48Q7RTY5 328 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 GPR142Q7Z601 462 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 SYVN1Q86TM6 617 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 C17orf64Q86WR6 236 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 ZNF677Q86XU0 584 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 FBXO16Q8IX29 292 aaPredicted RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 KLHDC8AQ8IYD2 350 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 SLC22A18ASQ8N1D0 253 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 CHCHD4Q8N4Q1 142 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 GVQW1Q8N7I0 195 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 TPRX1Q8N7U7 411 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 RELL2Q8NC24 303 aaPredicted RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 RNF149Q8NC42 400 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 OR13F1Q8NGS4 319 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 OR13C5Q8NGS8 318 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 RHOXF1Q8NHV9 184 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 FNDC8Q8TC99 324 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 SLC26A7Q8TE54 656 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 GRK7Q8WTQ7 553 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 CRYGNQ8WXF5 182 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 SEPT8Q92599 483 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 P3H4Q92791 437 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 DNASE1L2Q92874 299 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 MRPL24Q96A35 216 aaKnown RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 FAF2Q96CS3 445 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 ERP27Q96DN0 273 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 PCED1BQ96HM7 432 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 CDHR1Q96JP9 859 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 AK8Q96MA6 479 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 GUCD1Q96NT3 240 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 TECTBQ96PL2 329 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 CCT8L2Q96SF2 557 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 S1PR3Q99500 378 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 ZNF184Q99676 751 aaPredicted RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 SSX3Q99909 188 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 AGPAT1Q99943 283 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 JPH2Q9BR39 696 aaPredicted RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 MLPHQ9BV36 600 aaPredicted RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 NTMT1Q9BV86 223 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 C19orf24Q9BVV8 132 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 RBM24Q9BX46 236 aaKnown RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 EDEM3Q9BZQ6 932 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 TNMDQ9H2S6 317 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 NT5DC2Q9H857 520 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 MINDY3Q9H8M7 445 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 ZNF702PQ9H963 129 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 VIPAS39Q9H9C1 493 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 RPF1Q9H9Y2 349 aaKnown RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 Q9HAA7 133 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 KCNK13Q9HB14 408 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 C3orf14Q9HBI5 128 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 TUFT1Q9NNX1 390 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 PLSCR3Q9NRY6 295 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 STARD5Q9NSY2 213 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 MED17Q9NVC6 651 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 DNAJC11Q9NVH1 559 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 ZNF319Q9P2F9 582 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 RCOR3Q9P2K3 495 aaPredicted RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 DNAJB9Q9UBS3 223 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 SLC12A6Q9UHW9 1150 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 PSORS1C1Q9UIG5 152 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 RNF24Q9Y225 148 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 CA5BQ9Y2D0 317 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 KLHDC2Q9Y2U9 406 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 PRG3Q9Y2Y8 225 aaPredicted RBP0.27□□□□□ -2.37
VPS35-212ENST00000640313 FBXO7Q9Y3I1 522 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 ATG4BQ9Y4P1 393 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 TTLL3Q9Y4R7 772 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 OR1A2Q9Y585 309 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 GAKO14976 1311 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 MDN1Q9NU22 5596 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 ARID2Q68CP9 1835 aa0.27□□□□□ -2.37
VPS35-212ENST00000640313 KAT6BQ8WYB5 2073 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 KMT2DO14686 5537 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 A0A0A6YYC8 382 aaPredicted RBP0.26□□□□□ -2.37
VPS35-212ENST00000640313 A0A0A6YYD4 124 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 TRAV34A0A0B4J273 112 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 A0A0U1RQK1 487 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 C2orf92A0A1B0GVN3 265 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 A4D1N5 150 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 PINLYPA6NC86 204 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 MFSD2BA6NFX1 497 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 OOEPA6NGQ2 149 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 TSPY2A6NKD2 308 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 RNF212BA8MTL3 300 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 ERVV-1B6SEH8 477 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 TCP10L2B9ZVM9 353 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 NEDD8-MDP1E9PL57 170 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 I3L1I5 382 aaPredicted RBP0.26□□□□□ -2.37
VPS35-212ENST00000640313 M0R296 226 aa0.26□□□□□ -2.37
VPS35-212ENST00000640313 CCSO14618 274 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms