RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 UTS2RQ9UKP6 389 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 OR1F1O43749 312 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 LCMT2O60294 686 aaKnown RBP10.95□□□□□ -0.66
CLN6-217ENST00000636964 TBX6O95947 436 aaPredicted RBP10.95□□□□□ -0.66
CLN6-217ENST00000636964 ENGP17813 658 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 SLC9A3P48764 834 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 NUBP1P53384 320 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 TAS2R50P59544 299 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 COPZ1P61923 177 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 TAGLNQ01995 201 aaKnown RBP10.95□□□□□ -0.66
CLN6-217ENST00000636964 RHAGQ02094 409 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 OCA2Q04671 838 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 C2orf80Q0P641 193 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 RPE65Q16518 533 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 MEP1AQ16819 746 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 UAP1L1Q3KQV9 507 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 OTUD3Q5T2D3 398 aaPredicted RBP10.95□□□□□ -0.66
CLN6-217ENST00000636964 LYSMD2Q8IV50 215 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 FAM162AQ96A26 154 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 HHIPQ96QV1 700 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 DPH2Q9BQC3 489 aaPredicted RBP10.95□□□□□ -0.66
CLN6-217ENST00000636964 MUC13Q9H3R2 512 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 MMP17Q9ULZ9 603 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 AP3M1Q9Y2T2 418 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 HEATR5BQ9P2D3 2071 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 CLIC1O00299 241 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 CXCR6O00574 342 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 KLHL18O94889 574 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 RASGRP1O95267 797 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 GPIP06744 558 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 HOXB3P14651 431 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 ACPPP15309 386 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 PIGAP37287 484 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 VBP1P61758 197 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ARHGAP19Q14CB8 494 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 GALNT10Q86SR1 603 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 CHDHQ8NE62 594 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 CIDECQ96AQ7 238 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 OR2M4Q96R27 311 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 AIF1LQ9BQI0 150 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 C6orf106Q9H6K1 298 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 CYP8B1Q9UNU6 501 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 PPM1DO15297 605 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 HOXB9P17482 250 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 MAGP20916 626 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ACVR2AP27037 513 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 RAB28P51157 221 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 CCR8P51685 355 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ZNF763Q0D2J5 394 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ZNF542PQ5EBM4 170 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 MICU2Q8IYU8 434 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 CCDC116Q8IYX3 515 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ZCCHC7Q8N3Z6 543 aaKnown RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 OR8J2Q8NGG1 315 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 NETO1Q8TDF5 533 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 C16orf78Q8WTQ4 265 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 RLN3Q8WXF3 142 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 DNASE1L2Q92874 299 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 UBE2ZQ9H832 354 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 SPHK1Q9NYA1 384 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 UGT2A1Q9Y4X1 527 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 IGKV1-8A0A0C4DH67 115 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 DNAJB5O75953 348 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 NADKO95544 446 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 IFNA14P01570 189 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ATF4P18848 351 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 HNRNPA2B1P22626 353 aaKnown RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 PTX3P26022 381 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 ACTR1BP42025 376 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ASMTP46597 345 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ACTR1AP61163 376 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 NKG7Q16617 165 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 PRSS53Q2L4Q9 553 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 FBXO43Q4G163 708 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 SPATC1Q76KD6 591 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 TMEM145Q8NBT3 493 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 FAM83FQ8NEG4 500 aaPredicted RBP10.94□□□□□ -0.66
CLN6-217ENST00000636964 OR4E2Q8NGC2 313 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 OR2A1Q8NGT9 310 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 DYNC2LI1Q8TCX1 351 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 UBE2E3Q969T4 207 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 TM9SF2Q99805 663 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 EXD2Q9NVH0 621 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 STMN3Q9NZ72 180 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ZNF229Q9UJW7 825 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 CA14Q9ULX7 337 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 ICKQ9UPZ9 632 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 BOLA1Q9Y3E2 137 aa10.94□□□□□ -0.66
CLN6-217ENST00000636964 LAMA1P25391 3075 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 EVPLLA8MZ36 301 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 ST8SIA5O15466 376 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 SSX4O60224 188 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 GABARAPO95166 117 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 CD6P30203 668 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 PIK3CBP42338 1070 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 NFATC4Q14934 902 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 ANGPTL8Q6UXH0 198 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 METTL4Q8N3J2 472 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms