RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MFSD4BQ5TF39 518 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 FAM71E1Q6IPT2 247 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 IGF2-ASQ6U949 168 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 IKBIPQ70UQ0 350 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 PRSS58Q8IYP2 241 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 FAM9CQ8IZT9 166 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 ESX1Q8N693 406 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 KRTCAP2Q8N6L1 136 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 UCN3Q969E3 161 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 TBC1D20Q96BZ9 403 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 CNTNAP3BQ96NU0 1288 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 CNTNAP3Q9BZ76 1288 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 BRINP2Q9C0B6 783 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 MKKSQ9NPJ1 570 aaPredicted RBP13.6□□□□□ -0.23
LINC00339-208ENST00000634934 THSD1Q9NS62 852 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
LINC00339-208ENST00000634934 CTSFQ9UBX1 484 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 ZNF282Q9UDV7 671 aaPredicted RBP13.6□□□□□ -0.23
LINC00339-208ENST00000634934 WBP11Q9Y2W2 641 aaKnown RBP13.6□□□□□ -0.23
LINC00339-208ENST00000634934 COMMD3-BMI1R4GMX3 469 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 ACACBO00763 2458 aa13.6□□□□□ -0.23
LINC00339-208ENST00000634934 PRSS51A0A1B0GVH4 220 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 CYR61O00622 381 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 JRKO75564 520 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 DXOO77932 396 aaKnown RBP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 FHP07954 510 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 CD82P27701 267 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 HPCAL1P37235 193 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 CLDN8P56748 225 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 UFM1P61960 85 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 TRAP1Q12931 704 aaKnown RBP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 SQLEQ14534 574 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 PDCD4Q53EL6 469 aaKnown RBP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 VWA2Q5GFL6 755 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 FOXB2Q5VYV0 432 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 PAOXQ6QHF9 649 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 OVCH1Q7RTY7 1134 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 HPS6Q86YV9 775 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 ZC3H7AQ8IWR0 971 aaKnown RBP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 NLGN4XQ8N0W4 816 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 GOLM1Q8NBJ4 401 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 ICA1LQ8NDH6 482 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 NLGN4YQ8NFZ3 816 aaPredicted RBP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 ADAMTS18Q8TE60 1221 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 PYDC1Q8WXC3 89 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 RPF2Q9H7B2 306 aaKnown RBP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 MIEF1Q9NQG6 463 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 SDR39U1Q9NRG7 319 aaPredicted RBP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 MRPS33Q9Y291 106 aaKnown RBP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 PCDHA9Q9Y5H5 950 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 C1orf226A1L170 272 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 DYTNA2CJ06 578 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 WASHC1A8K0Z3 465 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 C9JVG2 144 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 PGRMC2O15173 223 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 RAD1O60671 282 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 SLC22A3O75751 556 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 ONECUT2O95948 504 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 DRD2P14416 443 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 DDCP20711 480 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 PRPS1L1P21108 318 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 ME2P23368 584 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 HNRNPFP52597 415 aaKnown RBP13.59□□□□□ -0.23
LINC00339-208ENST00000634934 CHN2P52757 468 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 STX5Q13190 355 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 MINDY4Q4G0A6 757 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 SFT2D3Q587I9 215 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 ANKRD26P1Q6NSI1 321 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 FAM198BQ6UWH4 519 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 UGT2A3Q6UWM9 527 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 SHISA6Q6ZSJ9 500 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 SNX32Q86XE0 403 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 TMEM52Q8NDY8 209 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 STT3BQ8TCJ2 826 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 NUDT8Q8WV74 236 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 FKBP10Q96AY3 582 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 OR1F2PQ96R84 312 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 ZBTB18Q99592 522 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 ACTL8Q9H568 366 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 REEP4Q9H6H4 257 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 WDR70Q9NW82 654 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 ZIM2Q9NZV7 527 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 C5AR2Q9P296 337 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 RIMS3Q9UJD0 308 aa13.59□□□□□ -0.23
LINC00339-208ENST00000634934 OR2W5A6NFC9 320 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 CLDN4O14493 209 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 ACOT8O14734 319 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 ANKRD28O15084 1053 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 SCAMP2O15127 329 aaKnown RBP13.58□□□□□ -0.24
LINC00339-208ENST00000634934 BMP10O95393 424 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 ALBP02768 609 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 C8BP07358 591 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 COX7A2P14406 83 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 PCSK2P16519 638 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 TCN2P20062 427 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 IL10P22301 178 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 GPX3P22352 226 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 JAK1P23458 1154 aa13.58□□□□□ -0.24
LINC00339-208ENST00000634934 PEX2P28328 305 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms