RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ENO3P13929 434 aaPredicted RBP12.62□□□□□ -0.39
SNX1-214ENST00000625244 CCND1P24385 295 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 CFPP27918 469 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 RPS4XP62701 263 aaKnown RBP12.62□□□□□ -0.39
SNX1-214ENST00000625244 GAB1Q13480 694 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 TOMM20Q15388 145 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 UBAP2Q5T6F2 1119 aaKnown RBP12.62□□□□□ -0.39
SNX1-214ENST00000625244 CENPUQ71F23 418 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 CPNE9Q8IYJ1 553 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 TBC1D19Q8N5T2 526 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 NUBPLQ8TB37 319 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 STARD4Q96DR4 205 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 MFSD3Q96ES6 412 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 UCN2Q96RP3 112 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 NAP1L3Q99457 506 aaPredicted RBP12.62□□□□□ -0.39
SNX1-214ENST00000625244 G6PC3Q9BUM1 346 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 ACBD3Q9H3P7 528 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 EIF2B3Q9NR50 452 aaKnown RBP12.62□□□□□ -0.39
SNX1-214ENST00000625244 KLHL42Q9P2K6 505 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 CLCF1Q9UBD9 225 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 LPAR3Q9UBY5 353 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 C15orf41Q9Y2V0 281 aa12.62□□□□□ -0.39
SNX1-214ENST00000625244 LRRC14BA6NHZ5 514 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 E7EVH7 732 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 KLF4O43474 513 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 CTNSO60931 367 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 SERPINA6P08185 405 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 CPN1P15169 458 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 SAT1P21673 171 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 SRYQ05066 204 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 CTBP1Q13363 440 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 ANKRD34AQ69YU3 496 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
SNX1-214ENST00000625244 SLC15A4Q8N697 577 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 ARIH2OSQ8N7S6 290 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 TRPV3Q8NET8 790 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 DIO2Q92813 273 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 NEIL2Q969S2 332 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 TRMT61AQ96FX7 289 aaKnown RBP12.61□□□□□ -0.39
SNX1-214ENST00000625244 PBKQ96KB5 322 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 QRFPRQ96P65 431 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 NPLQ9BXD5 320 aaPredicted RBP12.61□□□□□ -0.39
SNX1-214ENST00000625244 FRMD8P1Q9BZ68 369 aaPredicted RBP12.61□□□□□ -0.39
SNX1-214ENST00000625244 ADAM19Q9H013 955 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 SHARPINQ9H0F6 387 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 OPN3Q9H1Y3 402 aaPredicted RBP12.61□□□□□ -0.39
SNX1-214ENST00000625244 COPS7AQ9UBW8 275 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 MRPS33Q9Y291 106 aaKnown RBP12.61□□□□□ -0.39
SNX1-214ENST00000625244 DHRS7Q9Y394 339 aa12.61□□□□□ -0.39
SNX1-214ENST00000625244 FREM1Q5H8C1 2179 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 A0A096LNT2 108 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 CTAGE9A4FU28 777 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 ANKRD33BA6NCL7 494 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 H0Y3Z8 333 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 C16orf97H3BN30 126 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 PFDN6O15212 129 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 IGHV4-39P01824 125 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 THBDP07204 575 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 POU2F1P14859 743 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 SERPINB3P29508 390 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 CXCR5P32302 372 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 CDKN1AP38936 164 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 RPL21P46778 160 aaKnown RBP12.6□□□□□ -0.39
SNX1-214ENST00000625244 EEF1A1P68104 462 aaKnown RBP12.6□□□□□ -0.39
SNX1-214ENST00000625244 REEP5Q00765 189 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 STX4Q12846 297 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 RBBP5Q15291 538 aaKnown RBP12.6□□□□□ -0.39
SNX1-214ENST00000625244 TMEM249Q2WGJ8 235 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 EEF1A1P5Q5VTE0 462 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 ZNF549Q6P9A3 640 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 PRUNE1Q86TP1 453 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 YRDCQ86U90 279 aaKnown RBP12.6□□□□□ -0.39
SNX1-214ENST00000625244 SLC35B2Q8TB61 432 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 CD200R1Q8TD46 325 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 SLC5A11Q8WWX8 675 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 ATL1Q8WXF7 558 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 UCN3Q969E3 161 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 SENP5Q96HI0 755 aaPredicted RBP12.6□□□□□ -0.39
SNX1-214ENST00000625244 FAR2Q96K12 515 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 RILPQ96NA2 401 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 TSNARE1Q96NA8 513 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 GPR21Q99679 349 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 ALPK2Q86TB3 2170 aa12.6□□□□□ -0.39
SNX1-214ENST00000625244 PRR14LQ5THK1 2151 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 DYSFO75923 2080 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 SYNDIG1LA6NDD5 238 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 HRKO00198 91 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 B3GALT2O43825 422 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 LDB3O75112 727 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 NDUFS7O75251 213 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 TGM6O95932 706 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 ACTL6AO96019 429 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 FGGP02679 453 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 IGKV3-11P04433 115 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 APRTP07741 180 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 SOD3P08294 240 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 TCP1P17987 556 aaKnown RBP12.59□□□□□ -0.39
SNX1-214ENST00000625244 EGR1P18146 543 aa12.59□□□□□ -0.39
SNX1-214ENST00000625244 SRD5A1P18405 259 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms