RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.6□□□□□ -1.35
CBWD3-219ENST00000622817 TCEAL6Q6IPX3 200 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 FAM180BQ6P0A1 224 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 ZNF551Q7Z340 670 aaPredicted RBP6.6□□□□□ -1.35
CBWD3-219ENST00000622817 GPR155Q7Z3F1 870 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 DTWD1Q8N5C7 304 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 OR4K14Q8NGD5 310 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 OR52N2Q8NGI0 321 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 OR9A4Q8NGU2 314 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 IFI44Q8TCB0 444 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 ADAMTS18Q8TE60 1221 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 TANKQ92844 425 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 TCEAL3Q969E4 200 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 NEURL3Q96EH8 262 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 C10orf90Q96M02 699 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 NSMCE2Q96MF7 247 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 ZNF681Q96N22 645 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 DPH2Q9BQC3 489 aaPredicted RBP6.6□□□□□ -1.35
CBWD3-219ENST00000622817 EFHD1Q9BUP0 239 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 SPRTNQ9H040 489 aaPredicted RBP6.6□□□□□ -1.35
CBWD3-219ENST00000622817 GLIPR2Q9H4G4 154 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 GORASP2Q9H8Y8 452 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 FANCEQ9HB96 536 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 C11orf16Q9NQ32 467 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 SERTAD3Q9UJW9 196 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 USP22Q9UPT9 525 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 CLCA2Q9UQC9 943 aa6.6□□□□□ -1.35
CBWD3-219ENST00000622817 SCN3AQ9NY46 2000 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 RNF103-CHMP3A0A140T963 221 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 A0A1W2PQM1 296 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 DHRS12A0PJE2 317 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 WASHC1A8K0Z3 465 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 H0YIG0 161 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 H3BNX3 289 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CXCR6O00574 342 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CYR61O00622 381 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CHST10O43529 356 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 FOXS1O43638 330 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 DNAJB6O75190 326 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CACNA1HO95180 2353 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 KCNK5O95279 499 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 GPIP06744 558 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 UMPSP11172 480 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 FOLR1P15328 257 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 IL10P22301 178 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 PSMA4P25789 261 aaKnown RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 PPP2R1BP30154 601 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 GPC1P35052 558 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 GCKP35557 465 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 SOX11P35716 441 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 FEN1P39748 380 aaKnown RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CRATP43155 626 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 MAGEA8P43361 318 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CCT3P49368 545 aaKnown RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 PRIM2P49643 509 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 XKP51811 444 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 ITGA1P56199 1179 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 SIM1P81133 766 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 SHC2P98077 582 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 RBBP4Q09028 425 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 SLC14A1Q13336 389 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 GPR19Q15760 415 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 IRAK1BP1Q5VVH5 260 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 YOD1Q5VVQ6 348 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 SAXO2Q658L1 398 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 TLDC1Q6P9B6 456 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 BHLHB9Q6PI77 547 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 GPR179Q6PRD1 2367 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 ANGPTL8Q6UXH0 198 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 TMEM64Q6YI46 380 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 ZNF574Q6ZN55 896 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 DBX2Q6ZNG2 339 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 ARHGAP22Q7Z5H3 698 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 ZZZ3Q8IYH5 903 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CCDC116Q8IYX3 515 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 GPR135Q8IZ08 494 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CLEC4FQ8N1N0 589 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 C10orf111Q8N326 155 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 LRRC25Q8N386 305 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 OR5T3Q8NGG3 340 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 OR52E4Q8NGH9 312 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 OR5AK3PQ8NH89 298 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 PNPT1Q8TCS8 783 aaKnown RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 SFXN5Q8TD22 340 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 FIG4Q92562 907 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 NCLNQ969V3 563 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 FAM162AQ96A26 154 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 MOAP1Q96BY2 351 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 MVB12AQ96EY5 273 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CNRIP1Q96F85 164 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 GFM1Q96RP9 751 aaKnown RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CSF3RQ99062 836 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 EPS8L2Q9H6S3 715 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 SIRT3Q9NTG7 399 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 CUTCQ9NTM9 273 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 C6orf203Q9P0P8 240 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 ATXN7L1Q9ULK2 861 aaPredicted RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 MRPS33Q9Y291 106 aaKnown RBP6.59□□□□□ -1.35
CBWD3-219ENST00000622817 MAP4K5Q9Y4K4 846 aa6.59□□□□□ -1.35
CBWD3-219ENST00000622817 AP4S1Q9Y587 144 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms