RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SLC38A2Q96QD8 506 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 EPYCQ99645 322 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SATB2Q9UPW6 733 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 MRPS2Q9Y399 296 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 PTGDR2Q9Y5Y4 395 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 MYOFQ9NZM1 2061 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 IGHV1OR21-1A0A087WYE8 117 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 H3BML4 177 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 M0QX08 132 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 ALOX12BO75342 701 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 RSL1D1O76021 490 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 B3GALT4O96024 378 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 CST1P01037 141 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SCTRP47872 440 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 GDI2P50395 445 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 CDK6Q00534 326 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SF3B4Q15427 424 aaKnown RBP eCLIP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 CSRP2Q16527 193 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 ABRAXAS1Q6UWZ7 409 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 ZFAND4Q86XD8 727 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 ENDOVQ8N8Q3 282 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 EBF4Q9BQW3 602 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 ZPBPQ9BS86 351 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 TSPAN10Q9H1Z9 355 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SEMA6AQ9H2E6 1030 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 RPRD1BQ9NQG5 326 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 C14orf105Q9NVL8 296 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 GEMIN8Q9NWZ8 242 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 THUMPD1Q9NXG2 353 aaKnown RBP8.62□□□□□ -1.03
HDAC9-229ENST00000622668 IKZF2Q9UKS7 526 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 OTOFQ9HC10 1997 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 SIPA1L1O43166 1804 aa8.62□□□□□ -1.03
HDAC9-229ENST00000622668 TMCC2O75069 709 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 HSMCR30P0CW71 290 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 OR12D1P0DN82 309 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 CD1CP29017 333 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 AHRP35869 848 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 ERVPABLB-1P60509 514 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 XIAPP98170 497 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 MYBPC1Q00872 1141 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 LGALS3BPQ08380 585 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 KHDC1Q4VXA5 237 aaKnown RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 CYP4V2Q6ZWL3 525 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 NAGSQ8N159 534 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 OR1N1Q8NGS0 311 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 ASB12Q8WXK4 309 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 OR5P2Q8WZ92 322 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 IP6K3Q96PC2 410 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 SLC30A3Q99726 388 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 HOPXQ9BPY8 73 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 TMEM74BQ9NUR3 256 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 FAM120CQ9NX05 1096 aaKnown RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 PCTPQ9UKL6 214 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 MKLN1Q9UL63 735 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 BOKQ9UMX3 212 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 SPTBN1Q01082 2364 aaKnown RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 OR6B1O95007 311 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 PKLRP30613 574 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 CTSKP43235 329 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 PCBP4P57723 403 aaKnown RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 EMX2Q04743 252 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 PCDH1Q08174 1060 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 EXOC3L2Q2M3D2 409 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 PRAMEF17Q5VTA0 474 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 ABI3BPQ7Z7G0 1075 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 EPHX4Q8IUS5 362 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 FAM217AQ8IXS0 508 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 RNF175Q8N4F7 328 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 FGF11Q92914 225 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 NSMCE3Q96MG7 304 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 OR52B2Q96RD2 323 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 SSU72Q9NP77 194 aaKnown RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 DMRT3Q9NQL9 472 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 FARSBQ9NSD9 589 aaKnown RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 NCOR2Q9Y618 2525 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 FAM208BQ5VWN6 2430 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 LOC285556D6RIA3 1793 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 TDRD6O60522 2096 aaKnown RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 TRGV8A0A0C4DH27 118 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 FZD6O60353 706 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 ABCB7O75027 752 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 OPN1LWP04000 364 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF806P0C7X5 589 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 PIK3CBP42338 1070 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 CYB561P49447 251 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 WDR4P57081 412 aaKnown RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 SELENOVP59797 346 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 PCLAFQ15004 111 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 TRMT5Q32P41 509 aaKnown RBP8.61□□□□□ -1.03
HDAC9-229ENST00000622668 GFOD2Q3B7J2 385 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 DCST1Q5T197 706 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 GARNL3Q5VVW2 1013 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 SLC2A7Q6PXP3 512 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 CDHR3Q6ZTQ4 885 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 CYS1Q717R9 158 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 TMPRSS9Q7Z410 1059 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 KRTCAP2Q8N6L1 136 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 OR52E4Q8NGH9 312 aa8.61□□□□□ -1.03
HDAC9-229ENST00000622668 TRIM2Q9C040 744 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms