RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 VSTM2BA6NLU5 285 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 C9orf172C9J069 976 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 RFXANKO14593 260 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 NVLO15381 856 aaKnown RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 PDPK1O15530 556 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 JRKO75564 520 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 ERAL1O75616 437 aaKnown RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 STK17BO94768 372 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 TNFSF15O95150 251 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 KCNH1O95259 989 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 CPSF4O95639 269 aaKnown RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 ZCCHC18P0CG32 403 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 PORP16435 677 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 PPP2R1BP30154 601 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 CPOXP36551 454 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 FEN1P39748 380 aaKnown RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 XCR1P46094 333 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 MANFP55145 182 aaKnown RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 HSD17B7P56937 341 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 BTG2P78543 158 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 SLC25A3Q00325 362 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 PLIN5Q00G26 463 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 FOLH1Q04609 750 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 OCA2Q04671 838 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 NFYCQ13952 458 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 SPRED3Q2MJR0 410 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF750Q32MQ0 723 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 VWA2Q5GFL6 755 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 C3orf38Q5JPI3 329 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 LCN10Q6JVE6 187 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 FAM180BQ6P0A1 224 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF517Q6ZMY9 492 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 RINLQ6ZS11 566 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 ANKRD46Q86W74 232 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 OR4N5Q8IXE1 308 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 CCDC116Q8IYX3 515 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 CLECL1Q8IZS7 167 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 RBM15BQ8NDT2 890 aaKnown RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 PLPP5Q8NEB5 264 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 GOT1L1Q8NHS2 421 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 FBXO27Q8NI29 283 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 KLHL29Q96CT2 875 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 LRRC58Q96CX6 371 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 RNF31Q96EP0 1072 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 CNRIP1Q96F85 164 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 ZBED6CLQ96FA7 236 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 AMDHD1Q96NU7 426 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 PANX1Q96RD7 426 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 HOPXQ9BPY8 73 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 BTBD10Q9BSF8 475 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 INPP5KQ9BT40 448 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 ULBP3Q9BZM4 244 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 PAIP1Q9H074 479 aaKnown RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 SLC26A1Q9H2B4 701 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 GLIPR2Q9H4G4 154 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 AKIRIN1Q9H9L7 192 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 POLR1BQ9H9Y6 1135 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 SLAMF7Q9NQ25 335 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 LANCL2Q9NS86 450 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF282Q9UDV7 671 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-209ENST00000620393 CROTQ9UKG9 612 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 PADI1Q9ULC6 663 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 MMACHCQ9Y4U1 282 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 CLDN16Q9Y5I7 305 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 OR2W5A6NFC9 320 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 LCE2BO14633 110 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 GYG2O15488 501 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 FGF17O60258 216 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 LDB3O75112 727 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 C6orf47O95873 294 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 DLGAP3O95886 979 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 RECKO95980 971 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 GSNP06396 782 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 ZGLP1P0C6A0 271 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 CCNYL3P0C7X3 344 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 SLC35E2P0CK97 266 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 C8orf89P0DMQ9 161 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 CPMP14384 443 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 EFNA1P20827 205 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-209ENST00000620393 PTPN6P29350 595 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 NTSP30990 170 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 NUDT2P50583 147 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 NCBP2P52298 156 aaKnown RBP eCLIP7.53□□□□□ -1.2
CPNE3-209ENST00000620393 PSME3P61289 254 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 NCALDP61601 193 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 HBA1P69905 142 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 IGLV3-21P80748 117 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-209ENST00000620393 MXRA7P84157 204 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 ID2Q02363 134 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 DUSP2Q05923 314 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 STX4Q12846 297 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 SLC13A2Q13183 592 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 SERTAD2Q14140 314 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 TRMT5Q32P41 509 aaKnown RBP7.53□□□□□ -1.2
CPNE3-209ENST00000620393 RUNDC3AQ59EK9 446 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 C6orf10Q5SRN2 563 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 LRIF1Q5T3J3 769 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 MLIPQ5VWP3 458 aa7.53□□□□□ -1.2
CPNE3-209ENST00000620393 CPZQ66K79 652 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms