RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ZNF559Q9BR84 538 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 GALPQ9UBC7 116 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 NENFQ9UMX5 172 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 TEX264Q9Y6I9 313 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 LEFTY1O75610 366 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 OXSR1O95747 527 aaPredicted RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 PIGRP01833 764 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 MAGEA11P43364 429 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 SLC2A7Q6PXP3 512 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 TMEM151BQ8IW70 566 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 TRMT10AQ8TBZ6 339 aaKnown RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 SPTSSAQ969W0 71 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 ABRACLQ9P1F3 81 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 SPAG17Q6Q759 2223 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 PDLIM1O00151 329 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 MPPED1O15442 326 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 PGCP20142 388 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 MAGEA3P43357 314 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 RABIFP47224 123 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 FASLGP48023 281 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 NFE2L1Q14494 772 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 KIAA0319Q5VV43 1072 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 LHFPL3Q86UP9 236 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 ARL14Q8N4G2 192 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 SLC6A7Q99884 636 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 MEAF6Q9HAF1 191 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 TRPM6Q9BX84 2022 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 UNC119BA6NIH7 251 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 AURKAO14965 403 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 ANKRD28O15084 1053 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 OR12D1P0DN82 309 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 CHRM1P11229 460 aaPredicted RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 SLC18A1P54219 525 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 GALNT2Q10471 571 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 CNPY1Q3B7I2 92 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 ZNF829Q3KNS6 432 aaPredicted RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 MCHR1Q99705 422 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 RNF6Q9Y252 685 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 SCO2O43819 266 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 XPNPEP2O43895 674 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 ABCB7O75027 752 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 AK1P00568 194 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 HNRNPA1P09651 372 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 GPR17Q13304 367 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 DPY19L3Q6ZPD9 716 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 CTU1Q7Z7A3 348 aaKnown RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 WDSUB1Q8N9V3 476 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 NEIL3Q8TAT5 605 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 TBC1D15Q8TC07 691 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 DOT1LQ8TEK3 1739 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 THAP3Q8WTV1 239 aaPredicted RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 CANT1Q8WVQ1 401 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 FBRSL1Q9HCM7 1045 aaKnown RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 SMAD9O15198 467 aaKnown RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 HAPLN1P10915 354 aaPredicted RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 FUT4P22083 530 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 COQ8AQ8NI60 647 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 FOXO6A8MYZ6 492 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 SUOXP51687 545 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 ARHGAP11AQ6P4F7 1023 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 EPGNQ6UW88 154 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 ZNF852Q6ZMS4 543 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 FAM43BQ6ZT52 329 aaPredicted RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 ABHD12BQ7Z5M8 362 aaPredicted RBP10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 CSNK1A1LQ8N752 337 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 SLCO2A1Q92959 643 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 GLYATL1Q969I3 302 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 GPR174Q9BXC1 333 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 POTEKPQ9BYX7 375 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 COQ4Q9Y3A0 265 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 RNF215Q9Y6U7 377 aa10.72□□□□□ -0.69
CCDC144B-208ENST00000618081 MTMR11A4FU01 709 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 CYB5BO43169 146 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 ZNF217O75362 1048 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 LATS1O95835 1130 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 BCL2A1Q16548 175 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 CDCA2Q69YH5 1023 aaPredicted RBP10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 KLHDC10Q6PID8 442 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 CASTOR1Q8WTX7 329 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 GATAD2BQ8WXI9 593 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 OR5P2Q8WZ92 322 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 HSPBAP1Q96EW2 488 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 ZNF382Q96SR6 550 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 EBF4Q9BQW3 602 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 C1orf21Q9H246 121 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 IL21RQ9HBE5 538 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 ECM29Q5VYK3 1845 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 AGAP5A6NIR3 686 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 WNT7AO00755 349 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 RAB31Q13636 194 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 VTCN1Q7Z7D3 282 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 TCEANCQ8N8B7 351 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 ASB12Q8WXK4 309 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 RNF225M0QZC1 329 aaPredicted RBP10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 FAAHO00519 579 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 EMC8O43402 210 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 AHSGP02765 367 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 ADH6P28332 368 aa10.71□□□□□ -0.69
CCDC144B-208ENST00000618081 MAGEA8P43361 318 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms